Spinacia oleracea (spinach): 110794408
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Entry
110794408 CDS
T05137
Name
(RefSeq) TATA-box-binding protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
soe
Spinacia oleracea (spinach)
Pathway
soe03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
110794408
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
soe03000
]
110794408
03021 Transcription machinery [BR:
soe03021
]
110794408
Transcription factors [BR:
soe03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
110794408
Transcription machinery [BR:
soe03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
110794408
RNA polymerase III system
TFIIIB
110794408
RNA polymerase I system
SL1/TIF-1B
110794408
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
DUF3378
DUF4295
Motif
Other DBs
NCBI-GeneID:
110794408
NCBI-ProteinID:
XP_021855080
UniProt:
A0A9R0IV62
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All DBs
Position
4:complement(166931407..166937334)
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AA seq
200 aa
AA seq
DB search
MAEQSLEGSQPVDLVKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV
IMRIREPKTTALIFASGKMVCTGAKSENQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG
SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE
TYLAFENIYPVLTEFRKSQQ
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atggcagaacaaagcttggaaggtagccagccagtcgatttagtgaaacatccatctggg
attgttcctactcttcaaaatattgtctcaactgtcaatttagactgcaagttggatctt
aaagcaatcgcattgcaagctcgtaatgcagaatataacccaaagcgttttgctgcagtg
atcatgagaataagggaaccaaagaccactgctttaatatttgcttctggtaaaatggtt
tgcactggagctaagagtgagaatcaatcaaaactagctgctcgcaagtatgctcgaatc
attcagaagttgggatttccagcaaagtttaaggatttcaagattcaaaatattgttggg
tcatgtgatgttaagtttcctatcagactggaggggcttgcatattctcatggtgctttc
tctagttatgaaccggaattatttcctggcttgatctaccgaatgaagcagcccaagatt
gtgttgcttatatttgtgtcagggaaaattgttctcacaggagctaaggtaagggaagag
acttacttggcgtttgagaacatatatccagtgcttactgagtttaggaaaagccagcaa
tga
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