Spinacia oleracea (spinach): 110794500
Help
Entry
110794500 CDS
T05137
Name
(RefSeq) alpha-L-arabinofuranosidase 1-like isoform X1
KO
K01209
alpha-L-arabinofuranosidase [EC:
3.2.1.55
]
Organism
soe
Spinacia oleracea (spinach)
Pathway
soe00520
Amino sugar and nucleotide sugar metabolism
soe01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00520 Amino sugar and nucleotide sugar metabolism
110794500
Enzymes [BR:
soe01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.55 non-reducing end alpha-L-arabinofuranosidase
110794500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Alpha-L-AF_C
CBM_4_9
Motif
Other DBs
NCBI-GeneID:
110794500
NCBI-ProteinID:
XP_056684838
LinkDB
All DBs
Position
5:8515593..8522308
Genome browser
AA seq
680 aa
AA seq
DB search
MASSKPNFDHIMVWLLVGAFTILRVCSAHNHNHSLTDNKYPSTSLSVDISRGRQIPPIFF
GIFFEEINHAGAGGLWAELISNRGFEAGGRHIPSMISPWGAIGDEEAISIVTELSSCFKN
NPVALRMDIHCDQTTCPPGGVGIYNPGYWGMNIEEGNGYKVVFHIKSTGPLDSVMSLVSE
DGTQVLAFQRVTADAAKVKDWTKLEITLQARASYKNARFQFTTTQKGTIWLDQVSVMPNN
TYKGHGFRTDLMEMLLNLKPRFLRFPGGCYVEGRLLSNAFRWKETVGPWEERPGHFGDVW
NYWSDDGLGYLEYLQLAEDLGAEPVWVVNNGIGLQDQVDTHLIGPFVQEMLDSVEFAIGS
PNSTWGSLRAKLGHPTPFNLRHIAFGNEGCDLKSYTGNYLKFYKALKKNYPNIKVISNCD
ATQKPLDHPADLYDFHRYTNDTDMLGLTHLFGKIRRDDPHAPKAFVSEYAVIYPQDKMKN
GSFGGALAEAAFLLSLEQNSDVVEMVSYAPLFVNLNDRTWNPDAIFFNTYKAYGIASYWV
QTFFKESSGASLLNVHFHNHSMLENTYVTAISWTNKHEKKNYITIKVVNYNNVSANLKIS
INGVDANSVKPWRKTVLTCDDLQADNTLDNPTKVVPISSLLKSEIGRDIVVEVEPYSFTA
FDLINNGQSPSLEAKQVPNS
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atggcttcttctaagcctaattttgatcatataatggtttggttattagtcggagctttt
accattcttcgagtttgctcggctcataaccataaccatagccttaccgacaacaagtat
ccctcaacatccctctccgttgatatttctagaggacgtcaaatacctcctatttttttt
ggcatcttttttgaggagattaatcatgctggggctggtggtttgtgggcagagctgata
agcaatagaggattcgaagctggaggtcgacatataccatcaatgattagtccatggggc
gcaatcggagacgaagaagcaatatcaatagtaacagagctatcatcgtgctttaaaaat
aacccggtcgcacttcgaatggatatacattgtgatcaaacaacttgtcctcctggtgga
gttggaatttataatcctggctattggggaatgaatattgaagaaggaaacggttacaaa
gtggtgttccacattaaatcaaccggaccacttgacagtgttatgtcacttgttagcgaa
gatgggacacaagttcttgccttccagcgggtaacggctgatgccgcgaaagttaaagat
tggacaaagttggagattacattacaagctagagcatcatacaagaatgctagatttcag
tttactacaacccaaaaaggaacaatttggcttgatcaagtatctgttatgcctaataac
acatataagggtcatggatttcgaactgacttgatggaaatgcttctcaatttgaagcct
aggttccttagatttcccggtggatgttatgttgagggaagattgttaagtaatgctttt
agatggaaggaaactgtcggtccatgggaagaaaggccaggacattttggtgatgtttgg
aactattggagtgatgacggacttggttaccttgaatatcttcagctagcagaagatcta
ggtgctgagcccgtgtgggttgttaataatggaattggtctccaggatcaagttgatact
catctaatcgggccttttgtgcaagaaatgttggatagtgtcgagtttgctataggtagt
ccgaattcaacatggggttcccttcgtgcaaaattgggacatccaacgccatttaacctc
agacacattgcctttggtaacgagggttgtgacttaaagagctatacaggaaattatctc
aagttctacaaagccttgaagaaaaactatcctaacatcaaagtaatttcaaattgtgat
gcaacacagaagcccttagatcacccagccgatttatatgactttcatagatacacaaat
gatacggatatgcttggtctaactcatttatttgggaagataagaagggatgatcctcac
gcaccaaaggcttttgttagtgagtatgctgtgatatacccccaagataaaatgaagaac
ggatcatttggaggagcattagccgaagctgctttcttgctttcactagagcaaaacagt
gatgttgtcgaaatggtgagctacgccccacttttcgtaaacttgaacgacagaacgtgg
aatcctgatgcgattttcttcaatacatataaagcgtatggaattgctagttattgggtt
caaacattctttaaagaatcaagtggagcatcgcttttgaatgttcatttccacaaccat
tcgatgctcgaaaacacatacgttactgcaataagttggactaacaagcatgagaaaaag
aattatataactatcaaggtcgtgaactacaacaatgtatcggcaaatttgaagatatct
atcaatggagttgatgcaaactcggttaaaccatggaggaaaaccgtgctaacctgtgat
gatttgcaggctgataatacactagataatcctaccaaggtggtgccaatatcaagtttg
ctcaaaagtgaaatcggaagagacattgttgtagaggtcgaaccatactcgttcacagca
ttcgatctaataaataatggacaaagtccgagccttgaagctaagcaagttccaaattcc
taa
DBGET
integrated database retrieval system
