Spinacia oleracea (spinach): 110794560
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Entry
110794560 CDS
T05137
Name
(RefSeq) probable pectate lyase 18
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
soe
Spinacia oleracea (spinach)
Pathway
soe00040
Pentose and glucuronate interconversions
soe01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
110794560
Enzymes [BR:
soe01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
110794560
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
110794560
NCBI-ProteinID:
XP_021855231
UniProt:
A0A9R0ITD6
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Position
1:129008204..129011045
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AA seq
410 aa
AA seq
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MARYAMLIFFFFFLITLLAPTFVLSSTAVVPDPELVVHEVHRSINESIARRNLGYLSCGT
GNPIDDCWRCDPNWHDNRQRLADCAIGFGKNAIGGKNGRIYVVTDSGDDNPVNPKPGTLR
YAVVQDEPLWIIFERDMVIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHG
INVHDCKQGGNAMVRSNPHHYGWRTISDGDGVSLFGASHVWVDHVSLSNCMDGLIDAIMG
STAITISNNYMTHHDKVMLLGHSDSYTDDKNMQATIAFNHFGEGLVQRMPRCRHGYFHVV
NNDYTHWEMYAIGGSANPTINSQGNRFLAPDRRFSKEVTKHEDAPEDEWKNWNWRSEGDL
MLNGAFFTPSGAGASASYARASSLGARPSTLVGSITSTAGALNCRKGSRC
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atggctagatatgcaatgttaatcttcttcttcttcttcttaattactttgttagcccct
acctttgttctttcttcaacagcagttgtccctgaccctgaacttgtggtacatgaggta
cataggagtatcaatgagtccattgctaggaggaacttgggctacctttcatgtggaaca
ggaaaccccattgatgattgttggaggtgtgacccgaactggcacgacaaccgccaacgg
ctagccgattgtgcaatcgggttcggtaagaatgcaatcggaggcaaaaacgggcgcatt
tacgtggtgacagactcgggtgatgataacccggttaacccaaaacccgggacccttagg
tatgctgtggtccaagatgagccattatggatcatattcgaaagagatatggtaatcaga
ttaaaagaagagttgatcatgaactccttcaaaacaattgatggaagaggagctagtgtc
cacattgcaggtgggccatgcatcaccatacaatacgtgactaatatcatcatacatggt
atcaatgtacatgattgtaagcaaggtgggaatgctatggtacggagcaaccctcaccac
tacggatggcggacgatatcggacggtgacggtgtgtccctctttggtgctagccatgtt
tgggttgaccatgtttcgttgtcaaattgtatggatgggttgattgatgctatcatgggt
tcgaccgccatcactatttctaacaattatatgactcaccatgacaaggttatgttgttg
ggacatagtgattcatacactgatgacaagaatatgcaagctaccattgcttttaatcac
tttggtgaaggtcttgttcaaaggatgccaagatgtagacatggttacttccatgtggta
aacaatgactacacccattgggaaatgtatgccataggtggaagtgctaaccctaccatc
aacagccaaggcaacagatttttggcccctgatagaaggtttagcaaagaggtgactaaa
cacgaggatgcaccagaagatgaatggaagaattggaattggaggtcagaaggtgaccta
atgctcaatggtgcattttttacgccatcgggtgctggtgcttcagcaagctatgcaagg
gcctcaagtttgggagctaggccatctacccttgttggctcaattacttctactgccggt
gcacttaattgcaggaagggatctcgttgctga
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