Spinacia oleracea (spinach): 110794930
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Entry
110794930 CDS
T05137
Name
(RefSeq) replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
soe
Spinacia oleracea (spinach)
Pathway
soe03030
DNA replication
soe03410
Base excision repair
soe03420
Nucleotide excision repair
soe03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
110794930
03410 Base excision repair
110794930
03420 Nucleotide excision repair
110794930
03430 Mismatch repair
110794930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
soe03032
]
110794930
03036 Chromosome and associated proteins [BR:
soe03036
]
110794930
03400 DNA repair and recombination proteins [BR:
soe03400
]
110794930
DNA replication proteins [BR:
soe03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
110794930
DNA Replication Termination Factors
ELG1-RFC complex
110794930
Chromosome and associated proteins [BR:
soe03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
110794930
DNA repair and recombination proteins [BR:
soe03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
110794930
Check point factors
HRAD17(Rad24)-RFC complex
110794930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
AAA_22
AAA_lid_RFC1
RCF1-5-like_lid
RuvB_N
Mg_chelatase
AAA_16
AAA_assoc_2
AAA_11
SLFN-g3_helicase
AAA_5
AAA_14
PhoH
nSTAND_NTPase5
AAA_2
nSTAND3
AAA_24
ResIII
AAA_19
AAA_30
AAA_28
AAA_7
DUF815
NPHP3_N
RNA_helicase
AAA_25
Gp44_lid
bpMoxR
Parvo_NS1
NB-ARC
DNAX_ATPase_lid
AAA_18
TIP49
ATPase_2
T2SSE
Motif
Other DBs
NCBI-GeneID:
110794930
NCBI-ProteinID:
XP_021855587
UniProt:
A0A9R0IUV6
LinkDB
All DBs
Position
4:132872847..132891919
Genome browser
AA seq
340 aa
AA seq
DB search
MAPLLQSSQQWVEKYRPKKVKDVAHQDEVVKVLTNTLETSNCPHMLFYGPPGTGKTTTAL
AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKNFAAVAVGSAQRQGGYPCPPYKIII
LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLPEDVMI
TRILHICGEEGLNLDSQALSTLSSISQGDLRRAITYLQGAARLYGSSITSKDLISVSGVI
PEEVVQDLLAACKSGNFDLADKEVNNVISEGYPVSQMISQLFDIIVEADDLSDEQKARVF
KKLGETDKCLVDGADEYLQLLDVAGNTMRAFCNMAQDFSY
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atggcgccattgttgcagagctctcagcaatgggtggaaaaatatcggccaaagaaagtg
aaggatgttgctcatcaagatgaagtcgttaaagttctcacaaacactctcgaaacctcc
aattgtcctcatatgctattctatggcccacctggaaccggaaaaaccaccaccgcgctc
gccattgctcatcaacttttcgggcctgaactttacaagtccagggtgctagagttgaat
gctagtgatgatcgtggcatcaatgtcgttcgtacaaaaattaaaaattttgctgctgtt
gctgtaggttctgcacaacgacagggaggctatccttgtccaccttataaaatcataatt
ctagacgaggcagattcaatgactgaagatgctcagaatgcgttgcgtcgaacaatggag
acctactctaaagttacaaggttctttttcatctgtaattatattagcaggatcatagag
ccattggcttcaaggtgtgccaaatttagatttaaaccacttccggaagatgtaatgata
actcgtattttgcatatatgtggagaagaaggcctcaatctggattctcaggcactttcg
accttgagttccatttcacaaggtgatcttcgtcgggccattacatacttgcagggagct
gctcgcttgtatggttcatccattacctccaaggacttaattagtgtgtctggggtcata
ccagaggaggttgtacaggatttgttggctgcttgcaagagtggtaacttcgatttggct
gacaaagaagtgaataatgtcatttcagaaggctatccagtttcgcagatgatttctcag
ttatttgatattatcgtggaagctgatgatttgtcagatgagcagaaggcaagggttttt
aaaaagttgggtgaaacagataagtgtcttgttgatggagcagacgagtatttgcagttg
ctagatgttgctggtaacaccatgcgtgccttttgtaacatggcacaagatttctcctat
tag
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integrated database retrieval system
