Spinacia oleracea (spinach): 110795306
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Entry
110795306 CDS
T05137
Name
(RefSeq) uncharacterized protein LOC110795306
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
soe
Spinacia oleracea (spinach)
Pathway
soe03440
Homologous recombination
soe03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
110795306
03460 Fanconi anemia pathway
110795306
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
soe03400
]
110795306
Enzymes [BR:
soe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
110795306
DNA repair and recombination proteins [BR:
soe03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
110795306
FA (Fanconi anemia) pathway
Downstream FA components
110795306
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
HBB
Motif
Other DBs
NCBI-GeneID:
110795306
NCBI-ProteinID:
XP_021855997
UniProt:
A0A9R0IUZ0
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All DBs
Position
5:complement(116896172..116919194)
Genome browser
AA seq
1272 aa
AA seq
DB search
MEASTQKPENPKNVYHIGGIPVEFPYKPYGSQLAFMGRIISTLDRAQRDGHCHALLESPT
GTGKSLSLLCSALAWQRHRGKNPILQQQPQTKPDPRASSDPLSHGGGFVVDSQLSETSTP
EAAASATNCKSQNKKPVPTIYYASRTHSQITQVVREYRKTAYRVPMAVLASRKHYCTNAK
VRNGDNLDEECKLLLENKETGCPQFKNYHKVKSHPSLQRGGCHEAHDIEDLVKVGKTVKG
CSYFAARSLADDAHIVFCPYSYITNPIIRRAMEIDIKGAILVLDEAHNIEDISREAGSVN
VDEDALHKLQMELGQLCGGDTLTYQPLYEMVQDVLSWMERRKGALEKREFQRYVSCWTGD
KALKELQEANISQQCFPILQECAAKAIKAASDTEPELAHLSGMSAATLEGLFCSLSYFFK
GNGLHTNDYQLVVQRIIKKDTGSWTLTFSLWCLNPAVVFRDIADLSLSVILTSGTLSPMN
SFSSELGISFGTLLEAPHVIDVESQVWASIISTGPHDYPLNASYKTADGYTFQDAVGKSL
EELFKVVPGGSLVFFPSYKLMDKLCKRWSETGQWSRMNAIKPVFVEPRGGSQEDFEAVLK
GYYSAIHQGTKPALGKRRKAKKVNSNCSTTSTEANPVEVCKGGAAFLAVCRGKVSEGIDF
SDENARVVIIIGIPFPNINDIQVAEKKKYNDTYKCSKNLLSGSDWYCQQAFRALNQAAGR
CIRHRHDYGAIIFLDERFREERNTIYISKWLRKSIRTYENFETSVEELNSFFCNIKERVC
NVSKLQDPVADLENNTLDDSVKRSIKCRSQKLTNSQVSVNRVVSDTKKMPSTGLSHCLSR
KAGGSSDYITKRSQRNDGIQEASSVHEEDNENQKEIDKDCYSREGLRCWETPCTANFEER
IELSVVKETPMAENYAVSSPEATMNENDCYSTIIQTSTEFDQANHVSLTDSAQSPSKVTC
AEFTPERSGRENTNELMQEIYSSENLSVNSHAQKRRMFLNSQQMNSIQKMKFDGATAENT
QDFRIVDYSVLNDSSSQRTKFPKVNFSACEIKTSGQPSAANEGDISPKPVGFCLDQRLQI
VCSLCRSPLGLPENSSYVTCFLTSLSKTILTSLSKGNGPQSLQTSPSLVAVLIVDMLSVD
QRLFNRNSKDTPGQGIWCQDDGCVYNSIFCPFCISPNHCLGVQIMAADASNIQLIDKILF
YYDRLEVKTCLGLESKDSLADNSWCSDQTVDINSINKYAYQSQQHSPGSWRMTKTKSRLL
KRSPMSQSWTDS
NT seq
3819 nt
NT seq
+upstream
nt +downstream
nt
atggaagcatcaacccagaaacctgaaaaccctaaaaatgtctatcacattggaggaatt
cccgttgagttcccttacaagccatacggttcgcagcttgcattcatgggtcgtatcatt
tctacgcttgaccgagctcaaagagacggccattgccatgccttactcgagtctcctact
ggtactggaaagtctctctcactcctctgttccgcccttgcttggcagcgccaccgcggt
aaaaaccccattcttcagcagcagccgcagactaaacctgaccctagggcttcttctgat
cctcttagtcatggaggcggctttgtggttgattctcagctctctgagacttccacaccg
gaggcagctgcatctgcaacaaattgtaaaagtcaaaacaagaaaccagtgcctacgata
tattatgcctcgagaactcattctcaaatcactcaagttgttcgtgaataccggaagact
gcttacagggtcccaatggctgttttggcctctaggaagcattattgcaccaatgcaaaa
gtacgtaatggagataacctggatgaggaatgcaagttacttcttgaaaacaaagaaact
gggtgtccacagttcaaaaattatcataaagttaaaagtcatccatctctccagagaggt
ggctgtcatgaagctcatgatattgaagatctagtcaaagttggaaaaacagtaaaaggc
tgctcatattttgcagcgcgttcattggctgatgatgcacatattgtattttgcccttat
agttatataactaatccgattatccgaagagcaatggaaattgatatcaagggagctatt
cttgttcttgatgaagcccataatattgaggacatatctcgggaagctggtagtgtgaat
gttgatgaagatgctttgcataaactgcagatggagcttggtcagctatgtggaggtgac
acactaacttaccagccactgtatgaaatggtccaggatgtcttaagctggatggagcgc
cgaaaaggggccttagagaagcgcgagtttcagcgctatgtttcatgttggacaggtgat
aaagctctaaaggagctgcaggaggcaaacatatcacaacagtgcttcccaattttgcaa
gagtgtgctgccaaggctattaaagctgcttcagacaccgagccagagttagctcattta
agtggcatgtcagcagcaacactggaaggtcttttctgttcgcttagttatttttttaag
ggtaatgggcttcacacaaatgattaccaacttgttgtacaacggattatcaaaaaagac
acgggtagctggacacttactttcagtttgtggtgcttgaatccagctgtcgtattcaga
gatatcgctgatctttcattatccgtgattttaacgtctgggactttgtcaccaatgaat
tcattttcatctgaacttgggatctcatttggtactcttctagaggctccacacgtaatt
gatgttgaatctcaggtttgggcttctataatttctactggcccacatgattatccccta
aatgctagctataagacagctgatggatatacctttcaggatgctgttggtaaatccctg
gaggagctgttcaaggttgttcctggaggctcactcgtgttcttcccaagctataagcta
atggacaagctctgtaaaaggtggagtgaaacaggccagtggtctcggatgaatgccata
aaaccagtctttgttgagcccagaggaggaagccaagaggactttgaggctgttttgaaa
ggttattacagtgcgattcatcaaggcacaaagccagctcttggaaaaaggcgaaaggct
aagaaagtaaactccaattgttctacaacttctactgaagctaacccagtcgaggtctgt
aaagggggagctgcttttcttgctgtttgccgcggaaaggtgtctgaaggaattgacttt
tcagatgaaaatgcccgtgttgttataataattggtattccttttccaaacataaatgac
atccaagttgcagaaaagaagaaatacaacgacacatataaatgctccaagaatcttttg
agtgggagtgactggtactgccaacaagccttccgagcactaaatcaggctgcaggcaga
tgtattcgtcataggcatgattatggggccatcatcttcttagatgaacgatttcgcgag
gaaagaaatacaatctacatttcaaagtggctaaggaagtcaatcagaacatatgagaac
tttgagacatctgttgaggaattgaattccttcttctgtaacattaaggagagggtttgc
aatgttagtaagctgcaagatcctgttgctgatttagaaaacaatactcttgatgattct
gtcaaaagatccataaaatgtagaagtcagaaattgaccaattcacaagtcagtgtaaac
agagtggtttctgacaccaagaagatgccatctactggactttctcactgcctatcacgc
aaagctggcggtagttctgattatatcacaaaaagatctcaaagaaacgacggaattcag
gaagcctcatcagtccacgaggaagataatgaaaaccagaaagagattgacaaagattgc
tatagtagggagggtttgaggtgctgggaaactccatgcacagctaattttgaagaaagg
atagaactttctgttgttaaggagactcctatggctgagaactatgctgtatctagtcct
gaagcaaccatgaacgagaacgattgttattccaccataattcagacatctacggagttt
gatcaagcaaatcatgtgtctttaacagattcagctcaatctccttcaaaagtgacatgt
gccgaattcactccagaaaggagtggcagagaaaatactaacgagttgatgcaggaaata
tattcatccgaaaatttgagtgttaattctcatgcccagaaaaggaggatgttcctcaat
tcacagcagatgaactcgattcaaaagatgaaatttgacggggcgactgcagaaaataca
caggactttagaatagtggattattcagtgttaaatgacagttctagtcaaagaacaaaa
tttccgaaagtgaatttctcagcgtgtgaaattaagacgagcggtcaaccttctgcggca
aacgagggtgatatatctcccaaacctgttggtttctgtttggatcaacgattacaaatt
gtttgctcactctgcagaagtccactcggtcttcctgaaaacagctcgtatgtcacatgt
ttcttgacttcactatcaaaaactatcttgactagtctttccaaagggaatggaccacaa
agtctgcagacttcaccatctcttgtcgcagttctgatagtggatatgctatcagttgat
cagagactttttaataggaatagcaaagataccccaggacagggtatctggtgccaagat
gatggatgtgtatacaattccatattctgccctttttgcatttctcccaaccattgtctt
ggagtgcagatcatggctgctgatgcatcaaatattcagttgattgataagatactcttt
tactatgatcgcctggaagttaagacttgcctaggactggagagcaaggattctttggct
gataacagttggtgttcagatcaaacagttgatataaattctattaataaatatgcatat
cagtctcagcagcacagtccaggaagctggagaatgacgaaaacaaagtcaagactacta
aagaggagccctatgtcacagtcctggacagattcctaa
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integrated database retrieval system
