Spinacia oleracea (spinach): 110795633
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Entry
110795633 CDS
T05137
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit B
KO
K07466
replication factor A1
Organism
soe
Spinacia oleracea (spinach)
Pathway
soe03030
DNA replication
soe03420
Nucleotide excision repair
soe03430
Mismatch repair
soe03440
Homologous recombination
soe03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
110795633
03420 Nucleotide excision repair
110795633
03430 Mismatch repair
110795633
03440 Homologous recombination
110795633
03460 Fanconi anemia pathway
110795633
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
soe03000
]
110795633
03032 DNA replication proteins [BR:
soe03032
]
110795633
03400 DNA repair and recombination proteins [BR:
soe03400
]
110795633
Transcription factors [BR:
soe03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
110795633
DNA replication proteins [BR:
soe03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
110795633
DNA repair and recombination proteins [BR:
soe03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
110795633
MMR (mismatch excision repair)
110795633
DSBR (double strand breaks repair)
HR (homologous recombination)
110795633
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
TTc_toxin_rep
Motif
Other DBs
NCBI-GeneID:
110795633
NCBI-ProteinID:
XP_021856348
UniProt:
A0A9R0IVE7
LinkDB
All DBs
Position
5:12819105..12822728
Genome browser
AA seq
626 aa
AA seq
DB search
MEVKTVTPDAISKIIANPSPDSSDDVPDLVVQVLDLKSVGNRFMFTASDGKQKLKGILQS
SFSDMVSSGAIQNLGLIRVLDYTLNDIPNKPEKYLLVTKCESVSPALEAEFKAEEKTEDG
SAAKRQKLEVDGKAEDNKEGSGIMLRPKMDVVAKSAAQIMNEQRGNAAPAARMGMTRRVY
PLASLNPYQGNWTIKVRVTSKGTLRTFNNARGEGNVFNVELTDEDGTQIQATMFNAIAKK
FYDTFEVGKVYYISKGSLKVANKRFNTTKNDYEMTINENSVVEVAIDERVYIPEPKFNFV
PIDQLGIYVDGKDLVDVIGVVQNVSPTMSIRRKANNEVIPKRDITIADESNKTVVVSLWN
DHATTIGQELMDMADKSPVVAIKSVKVGDFQGVSLSAISKSIVKINPDLPESEKLRTWYD
SEGKEASLASVGAGMTPSPNAGGRSMYTDRVSISHITSNQSLGEDKPVFFSLKACISLIK
PDQAMWYRACKTCNKKVTEAFGSGYWCEGCQKNEEECNLRYIMVAKISDASGETWVSTFN
DQAEKIIGCPADELDKLKSQGGEDNTFQTILKEASWEPQTFRVSVAQTEYNNEKRQRVTV
RAIAPVDFAAETSFLLGEISKMKVSQ
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atggaggtgaagacagtgaccccagatgcgatttcgaagattattgctaacccgtctcct
gattcttccgatgatgttccagatcttgttgttcaagtccttgatttgaaatccgtcggc
aatcgtttcatgtttaccgctagtgatggaaaacaaaagctcaagggaatactgcagtca
agtttttcagatatggtctcctctggagctattcagaacctgggacttattcgagttctc
gattacaccctcaacgacatcccaaacaaacctgaaaagtatttgcttgtaacaaagtgt
gagtctgtgtctcctgccctggaggcggagtttaaggctgaggagaaaactgaggatggc
agcgctgccaaaaggcaaaaactagaggttgatgggaaagctgaggataacaaggaaggt
tctggtataatgttgaggcctaagatggacgttgttgccaaatcagctgctcagatcatg
aatgagcaaagaggaaatgccgcacctgctgcaagaatgggtatgactagaagagtgtac
cctcttgcttctttgaacccttaccaagggaactggaccatcaaggtccgagttaccagt
aaggggacactacgaaccttcaataatgcgagaggagaagggaatgtcttcaatgttgag
ctaactgatgaagatggtactcaaatacaagcaactatgttcaatgcaatagcaaagaag
ttctatgacacctttgaagtagggaaggtttactatatctcgaagggatctcttaaagtt
gctaataagaggttcaacacaacgaaaaatgactatgagatgaccatcaatgagaactca
gttgttgaggtagccattgatgaaagggtatatatccctgaaccaaagttcaactttgtt
cctattgatcagttgggcatatatgttgatggaaaggatcttgtagatgttattggagtt
gttcagaatgtttccccgactatgagtattaggcgaaaagccaacaatgaggtgattcca
aagcgtgacataactattgctgatgaatcgaacaaaactgttgtagtttcgttgtggaat
gatcatgcaactaccattgggcaagaactgatggatatggctgataagtctcccgtagtt
gccattaaatctgttaaagttggagacttccagggtgtatcattgtcagcaataagcaaa
agcatagtaaaaatcaatcctgatttacccgagtcggaaaagctgagaacttggtacgat
tctgaaggtaaagaggcctcattggcatctgttggtgcaggaatgaccccttctcctaat
gctggagggaggtcaatgtacactgatagagtctccatttcacatatcacaagcaaccaa
tctttgggtgaagacaagcctgtgttctttagcttgaaagcgtgcattagtttgattaag
cctgatcaggcaatgtggtatcgggcttgcaagacctgcaacaagaaggttacagaagct
tttggttctggatactggtgtgaaggttgccaaaagaatgaagaagaatgcaacttaaga
tacattatggtagcaaagatttcagatgcaagtggtgaaacatgggtttcaactttcaat
gatcaagctgagaaaatcatcgggtgccctgctgatgaacttgacaaattgaaatcacag
ggaggagaagataacaccttccaaacaatactaaaagaagcaagctgggaacctcaaacc
ttccgtgtaagcgtggctcaaactgagtacaataacgagaagagacagagggtaactgta
agagctattgccccagttgattttgcagctgagacaagcttcctgcttggcgaaatatct
aaaatgaaagtttctcagtaa
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