Spinacia oleracea (spinach): 110796208
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Entry
110796208 CDS
T05137
Name
(RefSeq) ribonuclease II, chloroplastic/mitochondrial isoform X1
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
soe
Spinacia oleracea (spinach)
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
soe03016
]
110796208
Enzymes [BR:
soe01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
110796208
Transfer RNA biogenesis [BR:
soe03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
110796208
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Gene cluster
GFIT
Motif
Pfam:
RNB
HTH_RNase_II
CSD_RNase_II
Motif
Other DBs
NCBI-GeneID:
110796208
NCBI-ProteinID:
XP_021856931
UniProt:
A0A9R0K3A4
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Position
5:22623105..22640660
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AA seq
811 aa
AA seq
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MMAVRAVNGCSIIRPSTCSSPSLSSLLCCFHQFRPLYSTTRSKSGCLTSNCRFQLHFNGY
SGKFGVFAFHSLVDSVLEELQERRRTRRVCASNRLVLTSSGELLKDKLEKQGLRVGLLLE
FKKDSERVLLAVSQKRDGKKNWMVSDQNGTTCSIKPQQITYVVPGVEDFNHTQIPEFLQK
AQENLDSSLLELAWAELLEKNKSVTPDELAEMIYGIAEPLESYCAHHLLSRDEIYFSVLE
SKGYCSVYTPRSTDQVEELLGRKLAKETAEKELQEFIQLLYSAKARPLDAKLPRSSWISE
DRIRDRIDALAAYAVDTFCSESQKRTAQTILTAAGMAKTASSALNLLIDIGYFPVHVNLD
LLKLNIRTDHSEDIVLAAEDLLSESYDIDEIRRNDLTHLKVYAIDVDEADELDDALSAAR
LQDGRIKIWIHVADPTCLVRPGSNLDKEAMSRGTTIFLPTATYPMFPEKLAMEGMSLKQG
TNCNAVTVSVVLHFDGSISEYSVENSIIRPTYMLTYESASELLHLSLEEEAELKILSEAA
SLRLQWRRQQGAVDTSMIETRVKVANPDEPEPHINLYVENQADPAMRLVSEMMILCGEVV
ATFGSFNKIPLPYRGQPQSNIDVSAFSHLPEGPVRSVAVVKTMRAAEYDFRKPIRHGVLG
VPGYVQFTSPIRRYMDLLAHYQVKSFIRGDAPPFSAGQLEGIAAIVNMQHRVARKLFSSS
LRYWVLEYLRRQPKERKYRALILRFIKDRIAALILVEIKSHHSVHYFPKKEVGLQASAWV
LVGSQVGDEIEVQVEEAQPRDDILSLKQVAE
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atgatggcggttcgtgctgtcaatggctgcagcattattcgtccatccacatgttcttcc
ccttctctctcctctttgttgtgttgtttccatcaatttcgacctctttattcaacaact
cgctctaaatcggggtgccttacctcaaattgccgattccagcttcatttcaatggttat
agcggaaaattcggagtttttgcgtttcacagtttagtcgacagcgtcttggaggagctt
caggagaggcgtaggacaaggcgagtttgcgcttccaacaggttggtattaacaagcagt
ggagagcttcttaaagacaaacttgaaaagcaaggacttcgagtcggcttgctgttggag
tttaaaaaggactccgaaagggttttgctagcagtgtctcagaaacgtgatgggaagaag
aactggatggtttctgatcagaacggtacaacatgctcgataaaaccacagcagataact
tatgttgttcctggtgttgaggatttcaatcatacccaaattccagagtttttgcagaaa
gctcaggaaaacttggattcatctctgcttgagcttgcctgggccgagctgcttgagaag
aataaatcagtgactccagacgagttggcagagatgatatatggtattgctgaacctctt
gagagctattgtgcacatcacttgctgtcaagggatgaaatctacttctctgtgctggag
agtaaaggttattgttctgtttacactcctcgatctactgatcaggttgaggaacttcta
gggaggaaacttgccaaggagactgctgaaaaggaacttcaggagttcatacagttatta
tattctgctaaggcaagacctttggatgcaaagcttcctagatcctcatggatttcggag
gaccggattcgtgatcgtattgatgccctggctgcttatgcggttgatactttctgcagt
gaaagtcaaaagagaacagctcagacgattcttacagctgcggggatggcaaaaacagca
tcatcagcgttaaatcttctaatagatattggttattttccggtacatgttaatcttgat
ctgttgaagctgaatattcgtaccgatcactcagaggatattgtgttggctgctgaagat
ttgctgtcagagtcttatgatatagatgagattcggaggaatgaccttactcatttgaag
gtctacgctattgatgttgatgaggctgatgagcttgatgacgcacttagtgcggcaagg
ttacaagatggccggatcaagatctggatacatgtggcagatccaacctgcttagttcga
cctggaagcaatctggacaaagaggccatgagcagaggaactactatctttctgcctaca
gctacttatcctatgttcccagagaagcttgcaatggaaggaatgagcttaaaacaaggg
acaaactgcaatgctgtgacagtatctgttgtgcttcattttgatggcagcatcagtgag
tattctgtagagaattccattataagaccaacatacatgctcacctatgaaagtgcatca
gagctccttcatttgagtcttgaagaggaagcggagttaaagattctgtctgaggctgca
tctctacgtttgcaatggcgtagacagcagggtgccgttgacacgtcaatgatagaaaca
cgtgtcaaagtggcaaatcctgatgaaccagaaccacatatcaatctatatgtagagaat
caagctgaccctgcgatgcgcctggtttctgagatgatgattctttgtggagaggtcgtt
gctacatttggatctttcaacaaaattcctttaccttatagaggacagcctcaatcaaat
atagatgtatctgcattttctcatcttcctgaaggcccagtacggagtgttgctgtagtt
aaaacaatgcgtgctgccgaatatgattttaggaagccaatacgacacggagttctagga
gttcctggctatgttcagtttacttctcctatacgtagatatatggatcttcttgcccat
tatcaggtaaaatcttttattcggggtgatgcccctccattttcagcaggtcagctagaa
ggcatagcagcgatagttaatatgcagcatagagttgcaagaaagttgttcagtagtagt
cttcggtattgggtattggagtatttaagaaggcagccaaaggaaagaaaataccgtgct
ctgattctcaggttcattaaggaccgcattgcagccttgattttggttgagatcaaaagt
catcactccgtacattactttcctaaaaaggaggttgggctgcaagcttctgcatgggtc
ttagtgggatcccaggttggggatgaaattgaagttcaggtagaagaagctcaaccaaga
gatgatattttgtccctcaagcaggttgctgaatag
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