Spinacia oleracea (spinach): 110796405
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Entry
110796405 CDS
T05137
Name
(RefSeq) ATP-dependent DNA helicase At3g02060, chloroplastic isoform X1
Organism
soe
Spinacia oleracea (spinach)
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CarD_TRCF_RID
Cas3-like_C_2
TRCF
DUF3198
RecG_dom3_C
Motif
Other DBs
NCBI-GeneID:
110796405
NCBI-ProteinID:
XP_021857154
UniProt:
A0A9R0K3I7
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Position
3:50424399..50446751
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AA seq
821 aa
AA seq
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MAATNFSLLQISDFCFKLSSNPQISTISINFKCPCRHQCRKVRLLVCNAVYTEGGSRTKS
SLGKEKVSDSEFEPISALNERIRRDHGTRDAAKPGLDSKEAEKYIQLVKQQQQRGLEKLK
GRSKEESGGVISYRVDPYTLKSGDYVVHKKVGIGRFVGIKFDLPKDGTEPIEYVFIEYGD
GMAKLPVKQASRMLYRYNLPNEPKKPRTLSKINDKSAWEKRRTKGKVAVQKMVVDLMELY
LHRLKQKRPPYPKCLAMAEFTTQFLYEPTPDQKQAFIDVEKDLTERETPMDRLICGDVGF
GKTEVALRAVFCVVSAGKQAMILAPTIVLAKQHFDVISQRFSMYPNIKVGLLSRFQTKGE
KEEYLRQIKKGELDIIVGTHSLLGNRVVYNNLGLLVVDEEQRFGVKQKEKIASFKTSVDV
LTLSATPIPRTLYLALTGFRDASLISTPPPERVPIKTQLSAFSKENVVSAIKYELDRGGQ
VFYVLPRIKGLEEVMGFLEPSFPDVEIAIAHGKQYSKQLEETMENFSLGKTKILICTNIV
ESGLDIQNANTIIIQDVQQFGLAQLYQLRGRVGRADKEAYAYLFYPDKSLLSDQALERLS
ALEECRELGQGFQLAERDMGIRGFGNIFGEQQTGDVGNVGIDLFFEMLFESLSKVEEHRI
KSIPFQEVQLDININPHLSSEYINYLENPMELINDAEKAAEKDILSLVQFTEDLRRQYGK
EPNSMEILLKKLYVKRMAADLGINRIYVIGRMVGMETNMTKNVFRMIKDSMASDVLRSSL
IYDDGQIKTELLLELPREQLLNWIFQCIGELHASLPALIKY
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atggctgccacaaacttttctctcctccaaatttcagatttctgcttcaaattgagctca
aaccctcaaatttccaccatctctatcaacttcaagtgtccgtgtcgccaccaatgtcga
aaagtccggcttttagtctgtaatgctgtttacactgaagggggttcccggacaaaatca
tccctagggaaggagaaggtttctgactcggaattcgaaccgatttcggccttaaacgag
aggataaggagggatcatggtactcgggacgctgcgaaaccgggtttggattctaaggag
gctgagaagtatattcagcttgtgaagcagcagcagcaaagagggttggagaagctgaaa
ggaagaagtaaggaggaaagtggtggggtgattagctatagagtggacccttatactcta
aagtctggggattatgtggttcataagaaagtgggtattgggagatttgtggggattaaa
tttgatttgccaaaagatggtacagaacctattgagtatgtgtttattgagtatggagat
ggtatggctaagcttcctgttaagcaggcgtcgcgaatgctctaccgatataatcttcca
aatgaaccaaaaaaaccacgaacacttagtaagataaatgacaaaagtgcatgggaaaaa
aggagaaccaaaggaaaggttgctgtccagaaaatggtagttgacttgatggaattatat
ttacataggcttaagcagaaaaggcctccgtatccgaaatgtctggcaatggctgagttt
actactcagtttctttatgagcccacaccagatcagaaacaggcttttattgatgtagag
aaggatttgacagagagagaaacaccaatggacagattgatatgtggagatgttggattt
ggcaagactgaagttgcattacgtgcggtcttttgtgttgtttcagcaggaaagcaggca
atgattctagcaccaactattgtgttagccaagcagcattttgatgttatttcacagcgt
ttttccatgtatcccaatatcaaggttggacttctgagcaggtttcagaccaaaggagag
aaagaggaatacttgcgccaaataaaaaaaggtgaactggacattattgtgggaactcat
tcacttcttggaaatcgcgttgtttataataatctgggcctccttgtagttgacgaggaa
cagagatttggagtcaagcagaaggagaagattgcttccttcaaaacttcagttgatgtc
cttacactttcggcgacaccaataccgcggactctctatctagctttgacaggatttcgt
gatgctagtttaatctcaacacctcctccagaaagagtcccaataaagacacagctttca
gcattcagtaaagaaaacgtagtatcagcaatcaaatatgagctggacagaggtggccaa
gtcttctatgttcttcctcgtataaaaggacttgaggaagtaatgggttttcttgaacca
tcgtttccggatgttgaaatagccattgctcatggaaagcaatactcgaaacagcttgaa
gaaacaatggaaaacttttccctgggaaaaactaaaattcttatatgtacaaatatagtg
gaaagtggattggacattcaaaatgcaaacactatcattattcaggatgttcagcaattt
ggacttgcacagctatatcagctgcgaggcagggtggggagagcagataaggaagcttac
gcgtatctgttttacccagataaatctctgctgtctgatcaagcgctggagagactttca
gcccttgaagagtgtcgtgaacttggccaaggctttcagcttgctgaaagagacatgggg
atcagaggttttggtaatatatttggtgagcagcaaacaggtgatgtaggaaatgtgggc
attgatctctttttcgagatgctttttgagagcttgtccaaggttgaagaacaccgtatt
aaatctattcctttccaagaagtccagcttgatataaatataaatcctcatctctcatcc
gagtacattaattatctagagaatcctatggaattaatcaatgatgctgagaaggcagca
gagaaggatatcttaagtttagttcaatttacagaggatctgcggcgacaatatggaaaa
gagcccaactcaatggagatcctattaaagaaactttatgtgaaaagaatggctgcagac
cttggtattaaccgaatatatgtcattggaaggatggttggcatggaaacaaacatgact
aaaaatgttttcagaatgatcaaggactccatggcttctgatgttctgcgtagttcactg
atatatgatgatggacaaataaagactgaactacttctggagctaccaagggagcaactc
ctcaattggatctttcagtgcataggagaacttcatgcttctttgccagcccttattaag
tactag
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