KEGG   Spinacia oleracea (spinach): 110796681
Entry
110796681         CDS       T05137                                 
Name
(RefSeq) DNA repair protein UVH3 isoform X1
  KO
K10846  DNA excision repair protein ERCC-5
Organism
soe  Spinacia oleracea (spinach)
Pathway
soe03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:soe00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    110796681
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:soe03400]
    110796681
DNA repair and recombination proteins [BR:soe03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     110796681
SSDB
Motif
Pfam: XPG_N XPG_I XPG_I_2 UBM AIM3
Other DBs
NCBI-GeneID: 110796681
NCBI-ProteinID: XP_021857447
UniProt: A0A9R0IYI8
LinkDB
Position
1:99683919..99697769
AA seq 1539 aa
MGVHGLWDLLAPVGRRVSVETLTGKRLAIDASIWMVQFMKAMRDERGEMVRNAHVLGFFR
RICKLLFLRTKPVFVFDGGTPALKRRTVIARRRQRENAQAKIRKTAEKLLLNHVKAMRLK
QLADNLKDQNYKNNSKGKGAMLNESDTTNKNEAVSESHNQEMLDEMLAASIQAEESGELA
TGSSGAAEIGSSSGNASASTAVLPKEDDDDESDEEMILPVTDGNVDPAVLAALPPSMQLD
LLVQMRERLMAENRQKYQKVKKVPQKFSELQIEAYLKTVAFRREIDQVQKAAAGKDVGGI
QTSRIASESNREFIFSSSFSGDKQLLASGEAEKIPKIQQTKEKKDSHFDILNAMASATKS
STESEPGIDEAVQTFIDEKGHRRVSSRRAMGIRMTRDLQRNIDLMKELEQERTTVNIEAK
AQTNPDMGGQSMESHCNVKSVEGVNDFNCDIVQNSTVNSSLEPESHKDALKSESCIKITF
DDDVKQRSFDGDDEFFSHLVVGDQVPLCSANNSSSDCEWEDGMISGERGSLINGNKLAAS
SFPAQDGNINDSDVEWEDGTTLMNDKCNSKFSDVEDINDEETGVKWQEELTITDIHEDAR
SLYSNLQTDISKGSAEEEAALQEAIRRSLEDSTGGKSSCVSYNLKADGCAFNRDLQLESC
LPLPSSHLERVLDGHQLSQSSVNMYNQSNFLSEKNSCALSNLGMHSTSGAFVPVGPAPHI
DTKNDLNEQQLSTSSENAQTSNLAGSGVPTDMAAGVPATLPENIVNDVTTERAFPSSNFD
MAHGNLVGHTSSILEEKTLYGDLKTSVGKDDTCHLSDDVKTSAFKDKENTLEPLGINVED
ELLVLDQEYKTLGDEQKRLERNADSVNAEMFVECQELLQMFGLPYIIAPMEAEAQCAYME
LANLVDGVVTDDSDVFLFGAQCVYKNIFDDRKYVETYFMKDIENELGLNREKLIRMALLL
GSDYTEGISGIGIVNAIEVLNAFPEEEGFHKFREWIESPDPAILGKVGVQSGSSSKKKGS
KASKNRMSNSKSDMEGNSAADSCTLLEYDDDEARNDIQKMKLTFMNKHRNVSKNWHIPAS
FPSDAVISAYAAPQVDKSTEPFAWGKPDIFSLRRLCWEKFGWASQKADELLSPVLKEYNK
HETQLRLEAFYTFNERFAKIRSKRIKQAVKGITGKQSSDLEKANDLQENPGKMEKKARAS
GNTRKKSVSKRKDHVVGVRNSSAKKLKSQQEKENKEEGLSTEVGSIGLCTEAEKQSKSDA
GSSRVRGRGRRAAAGRGRRKENSDSECDETSIHDHKSSSDEHELLPENMELPDSVRRSKR
ARKTANYLEEDEESDELVIPLNRTNKNCSDDGASGPTLSPFLSVHEAGMANASGEIDLPG
HGLPGDYLVAGGGFCAEEDEEEIECNQSSSVQKDTSTVDADSEYLQMGGGFCVDEEDDLH
FQECDGGGAFTITDALAETKEHGLTIGPHESISVAASVTGTVQGLQKVPSSDSNLSSGDK
LQNVDGNLSNAGVSTYIATPTSVNPFSALPYLKRKKKKP
NT seq 4620 nt   +upstreamnt  +downstreamnt
atgggagtgcacggcctgtgggaccttctcgccccggtgggccgccgtgtttccgtcgaa
actctcaccgggaaacgccttgccatcgatgctagcatatggatggtacaattcatgaag
gcgatgcgcgacgagagaggtgaaatggtgaggaatgctcatgtgctcggatttttccgt
cgcatttgcaagcttctgtttcttcgtacaaagccggtgttcgtgttcgatggcggaaca
cctgctttgaagcggaggactgttattgcgaggcggagacagagagagaatgcgcaggcg
aagattcgtaagactgctgagaaattgcttttgaaccatgttaaagcaatgagactgaaa
caactggctgataatctcaaggatcaaaattacaaaaacaattctaagggaaaaggggca
atgttgaatgaatccgacacaacaaataaaaatgaggcagtatcggagagtcacaatcag
gaaatgttagatgaaatgttggctgcatcaatacaggcagaggagtctggtgagcttgcc
actggatcaagcggtgctgccgagattggtagctctagtggcaatgcatctgcctctact
gcagtgcttcccaaagaagacgatgatgatgaatctgatgaagagatgatactaccagta
actgacggaaatgtggatccagctgtattagcagctttgcctccatctatgcaacttgat
cttcttgttcagatgagggaaagattgatggcagaaaacagacaaaagtatcaaaaagta
aaaaaggttcctcagaagttctctgaactccaaattgaggcatatcttaaaacagttgct
ttccgccgtgaaattgatcaagttcaaaaagctgctgccggaaaggatgtaggtggtatt
cagacttctcgaatagcatctgaatctaatagggaattcattttctcgtcatccttttct
ggagataaacagcttcttgcatcaggtgaagctgagaaaattcctaagattcaacaaacg
aaggaaaagaaggattctcactttgatattctcaatgccatggcttctgctaccaagtct
agtacagaatctgaaccaggtattgacgaagctgttcaaactttcatagatgagaaaggg
cataggcgtgtcagtagtagaagagctatgggcattcgtatgacaagagatttacagagg
aacatagatttgatgaaagaacttgaacaggagaggacaactgttaatattgaagcaaaa
gctcagactaaccctgatatgggaggtcaatcaatggaatctcactgtaatgtaaaatct
gtcgagggagtgaatgattttaactgtgacattgtgcaaaacagcacagtgaactcatca
ttagagcccgagagccataaggatgcactaaagagtgaaagttgtataaagataactttt
gatgatgatgtgaagcaaagatcttttgatggtgatgatgaatttttttctcatcttgtg
gttggagatcaggtaccactttgttctgctaacaattctagctcagattgtgaatgggaa
gatggtatgattagtggggaaaggggaagtttaattaatgggaataaattggctgcaagt
tcttttcctgcacaagatggaaatataaatgattctgatgtggaatgggaggacgggacc
actctaatgaatgataaatgtaattcaaagttttccgacgtggaagacatcaatgatgaa
gagactggagtgaagtggcaggaagaacttactatcactgatattcatgaagatgcccgg
tcgctttattcgaatcttcagacggacatctcaaaaggatccgcagaagaagaagctgct
ttgcaggaggctataaggaggagtcttgaggattcaactggtggaaagtcaagttgtgtg
tcatataatctgaaggctgatggctgtgcattcaatagagatctgcagttggaaagttgc
cttcctctgcctagctcacatctggagagggttttggatggtcatcagctatctcaatca
tctgttaatatgtataatcaatctaatttcttgtctgaaaagaattcctgtgctctgagt
aatcttggtatgcactcaacatcaggcgcatttgttcctgttggaccagcccctcacata
gataccaagaatgaccttaatgagcagcaactgagtactagctcagagaatgcacagact
agtaatctggctggttccggtgttccaacagacatggctgctggtgtacctgccacactg
cctgaaaatattgttaacgatgttacaactgagagggcttttccctcaagtaattttgat
atggcacatggaaatctcgttggtcatacatcatccattttagaggagaagacactatat
ggcgatctcaaaacgtcagtgggaaaagatgatacctgccatttaagcgatgatgtgaag
acttctgctttcaaagataaggaaaacactcttgaacccctgggaatcaatgtagaggat
gaattattagtgcttgatcaagaatacaaaactcttggggatgaacagaaaaggcttgaa
cgcaatgcagattcggttaatgctgaaatgtttgtggaatgtcaggaattacttcaaatg
tttgggttaccatatataattgcaccaatggaagcagaagctcaatgtgcttatatggag
cttgcaaaccttgtagatggggttgtcactgatgattctgatgtttttctcttcggagcc
caatgtgtatacaaaaatatatttgatgaccgcaagtatgtcgagacctactttatgaag
gatattgaaaatgagctaggtctgaacagagagaaattaattcgcatggctttgctgctc
gggagtgactatacggaaggtattagtggaattggaattgtcaatgctattgaagtttta
aatgcatttcccgaggaagaagggtttcataaatttcgtgaatggattgaatcgcctgat
ccagcaatacttggaaaagtgggggtgcagtcaggatccagctcaaagaaaaaagggtca
aaagcttctaagaataggatgagcaattctaaaagtgacatggaaggaaactctgcagct
gactcttgcactttgctggaatatgacgacgatgaggctaggaatgacatccaaaaaatg
aagctcactttcatgaataagcatagaaatgtaagcaagaattggcatatccctgcttct
tttccaagtgatgcagtgatctctgcttatgcagctccacaagtggataagtcaactgaa
ccttttgcttggggaaagcctgacattttttcccttcgtagattgtgctgggaaaagttt
ggatgggctagccagaaggctgatgagttgctttcaccagtcctgaaggagtacaataag
catgagactcaattgcggctcgaagcattttatactttcaatgagcgattcgccaaaatc
cgcagcaagagaataaaacaagcagtaaaggggataaccggaaaacagtcctcagacttg
gaaaaggctaatgatttgcaagagaatcctggaaaaatggagaaaaaagcacgtgccagt
ggtaacacaaggaaaaaatctgtttcaaaaaggaaagatcatgtagttggagtgagaaac
agttctgctaaaaagttaaaatcgcaacaggaaaaggagaataaagaagagggactgtca
actgaagtaggaagcataggactctgtactgaggcagaaaaacagagtaagagtgatgct
ggaagcagtagagtgagaggaagagggagaagagcagctgctggaagaggtagaagaaag
gagaattctgattctgagtgcgatgagaccagtatacatgatcacaagagtagcagtgat
gagcatgaactgctacctgaaaacatggagttgcctgatagtgtgcgaaggtcaaaacgt
gcccggaaaacagccaattatttggaggaagatgaggaaagtgatgaactagtaattcct
ctaaacaggacaaacaagaattgtagtgatgatggagcaagtggaccgacattgtctcct
tttttgagtgttcatgaagctggcatggctaatgctagtggagagatagaccttcctggt
catggcttgcctggagactatttagtagcgggtggtggattctgtgctgaagaagatgaa
gaagaaatagagtgtaatcaatcatcttctgtccagaaagacacttctactgttgatgca
gatagtgaatacttgcaaatgggtggtgggttctgtgtagatgaggaagatgatcttcat
ttccaagaatgtgatggaggtggagcattcaccattaccgatgctttagccgagactaaa
gaacatggcctcacaattggcccacacgaaagcatctcagttgcagcaagtgttaccggt
acggttcagggcttgcaaaaagtcccctcgtcggattccaacctaagttcgggtgataaa
cttcaaaatgttgatggaaacctgtctaatgcaggagtaagtacttacattgctactcca
acttctgtaaacccattcagtgctcttccgtatttgaaaagaaagaaaaagaaaccttga

DBGET integrated database retrieval system