Spinacia oleracea (spinach): 110796944
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Entry
110796944 CDS
T05137
Name
(RefSeq) CLIP-associated protein
KO
K16578
CLIP-associating protein 1/2
Organism
soe
Spinacia oleracea (spinach)
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
soe03036
]
110796944
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
soe04812
]
110796944
Chromosome and associated proteins [BR:
soe03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
110796944
Cytoskeleton proteins [BR:
soe04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
110796944
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
CEP104-like_TOG
XMAP215_CLASP_TOG
HEAT_EF3_N
HEAT
HEAT_EZ
TOR1L1_N
HEAT_2
Vac14_Fab1_bd
UTP20
Adaptin_N
Cnd1
PDS5
HEAT_Maestro
TTI1
MMS19_C
INTS1_R4
MMS19_N
Dopey_N
RRP12_HEAT
TPR_TTI1_N
SPO22
INTS7_N
Motif
Other DBs
NCBI-GeneID:
110796944
NCBI-ProteinID:
XP_021857732
UniProt:
A0A9R0IZ34
LinkDB
All DBs
Position
6:130070192..130093972
Genome browser
AA seq
1446 aa
AA seq
DB search
MEEALELARAKDTKERMAGVEHLHQLLEASRKPLTSSEVTSLVDTCIDLLKDNNFRVSQG
GLLALASAAVLSGDHFKIHFNALVPATVERLGDAKQPVRDAARRLLVTLMEVSSPTIIVE
RAGSYAWEHKSWRVREEFARTVTSAINLFASTELPLQRAILPPILHMLNDPNHSVREAAI
SCIEEMYMQIGPQFQDELQRHQLPSYMVKDINARLERIEPKPRSSDSVVSSNTVNEPKVN
NHNHNHNPKRSSPKAKNTSREASLFGGDGDVTEKPVEPVKVYSEKELIREFEKIASTLVP
EKDWSHRIAAMQRFEALVIGGATDYPCFRGLLKQLIGPLSIQLSDRRSSIVKQGCHLLNF
LSKELLGDFEACAEQFIPVLFKLVVITVLVIAESADNCIKTMLRNCKVARVLPRIADCAK
NDRNAALRARCCEYALLVLEHWPDEPEIQRAADLYEDMIRRSVSDAVSEVRTTARACYRM
FAKTWPDRSRRLFQSFDPVIQRIINEEDGGLHRRHASPSVRERNVPNTPQSSASLNLPGY
GTSAIVAMDKTATLASRASMSSGMLLSQSKSLDKGSDRSLESVLSSSKEKVSAIESLLRG
LDLSSKHNLSTVRSSSLDLGVDPPSSRDPPFPLAVPASNQVTSLSLDSKLSSVSGSKSRN
GGLVHSDMYSHLHASKDAGKLSYRSGLMNEPSSTLISYSAKRASERVHERNFNEEQTDIR
DSRRYMNSHMDRQFTDTPYRESTFRDSSYVPNFQRPLSRKNVTGRSTSSSRRRSFDDSHL
PLGETPSFVEGPGSLLEALGEGLSPTSDWCARVAAFNYVRSLLQQGPSGIQDIVQSFEKV
MKLFFKHLDDPHHKVAQAALLTLAEIIPSCRKPFESYMERILPHVFSRLIDPKEVVRQPC
STTLDIVGKTYGVDSLLPALLRSLDEQRSPKAKLAVIEFAIGSFNKHSVTSEGAGNIGIL
KLWLAKLTPLVHDKNTKLKEAAISCFISVFTRYDPTNVLNFILSLSVEEQNSLRRALKQY
TPRIEVDLMNFLQSKKERQRSKTAYDPSDIVGTSSEEGYMGVSKKTNYFGRFSANSPDSD
GGRRWNSMQDSTYSSGRINQATTEETHGNLYDSLDCGTSNDILDSRIKDKYIGNHTGESV
GGWTSRLENMEKSDNPAFLSTSRVDINVLQKSSDSIGVSAGLQPENGFPDELATDHTKTG
ILKTVSNSETGPSIPQILHSICNGFEGSPADIKQNAIHQLIEASVSNDPSVWSKYFNQIL
TTVLEVLDDPDSSVREFVLLLIAEMLRNQKEAMEDSVEIVMEKLLHVSKDTVPKVANEAE
NCLTTLLAQYDPFRCLSVIVPLLVTEDEKTLVACINCLTKLVGRLSQEQLVTQLPSFLPA
LFDAFGSQSADIRKTVVFCLVDIYIMLGKEFLPYLEGLNSTQLRLVTIYANRISQARTGA
PIDAGQ
NT seq
4341 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggccttagagctagcaagggcgaaagacaccaaggaaagaatggccggtgtc
gagcatcttcaccagcttctagaagcttcgagaaagcctttaacgtcttccgaggtcact
tcacttgttgatacttgcatagatctcctcaaagataacaatttcagagtttcgcaaggc
ggtcttcttgctcttgcttctgctgctgttctttctggtgaccactttaaaattcacttt
aatgctcttgttcctgctactgttgagcgccttggtgatgctaaacagcctgtcagggat
gctgctcgacgcctcttggttactcttatggaggtatcgtctcctacaattattgtggaa
agagcaggttcttatgcttgggagcacaaaagttggagagtccgcgaagaatttgcacgc
actgtaacatcagcaatcaatttgtttgcatctacggagcttcctctccaaagggccatt
cttcctcctatattgcatatgttaaatgaccccaaccacagtgttagggaagctgctata
tcctgcatcgaggagatgtatatgcagattgggcctcagtttcaagatgagctacaaaga
caccagcttccatcatatatggtgaaggatataaatgcaaggttggagaggattgaacca
aagccccggtcttctgatagtgttgttagtagtaataccgttaatgagcccaaggttaat
aatcataatcataatcataatcctaagcgaagcagtcccaaagccaagaatacttctcgt
gaggcatctctgttcggaggagatggagatgttacagagaagccagttgaacctgtgaaa
gtttactcagagaaggagctgatcagggaatttgagaaaattgcttcaacacttgtacca
gaaaaagattggtctcaccgtattgcagccatgcagagatttgaagcccttgtaattgga
ggtgcgactgattacccgtgttttcggggattgctaaagcaacttattggtcctttgagc
atacagttatctgatcgccggtcaagtatagttaagcaaggttgtcatttattaaatttt
ttgtcaaaggagttgctgggggacttcgaggcctgtgcagagcagtttattcctgttcta
tttaagctggttgtgataacggtactcgtaatagcagagtctgcagataattgcatcaag
acgatgttgcgcaactgcaaagttgcccgtgtgctccctagaatagcagattgtgctaag
aatgaccgaaacgcagcgctgcgtgccaggtgttgtgagtatgcacttttagtgctagaa
cattggcctgatgaacctgagatacaacgagcagctgatctgtatgaagatatgattaga
cgttctgttagtgatgcagtgagcgaggttcgaacaactgcaagggcttgctatagaatg
tttgcaaaaacttggccagatcgctctagaaggctatttcagtcatttgatcctgtaatt
cagaggataattaatgaggaagatgggggtttgcatagaagacatgcatctccttctgtt
cgtgaaagaaatgtgccaaatacacctcagtcatccgcgtctttaaatttgcctggttat
ggaacttctgctattgttgcaatggacaagactgcaactctagcgtcaagagcatcaatg
tcttctgggatgcttctgtctcagtcaaagtctcttgataaagggtctgaccgtagcctg
gaaagtgtattaagttccagcaaagagaaagtttcagcaattgaaagcttgcttagaggc
ctagatttgtcttcaaaacataatttatcgactgttagatcatctagccttgatctagga
gttgaccctccttcttctcgtgatcctccatttcctcttgctgttccagcttcaaatcaa
gtcacaagtttatcattagattcaaagttgtcatcagtcagtggaagtaaaagccgtaat
ggtggtctggttcattctgacatgtactctcatttgcatgcttcgaaagatgctggtaaa
ttatcatatcgcagtggtctcatgaatgagccgtcatcaacgttgatatcatactcagca
aagagggcttcggaaagagtacatgagagaaactttaacgaagagcaaactgatatcagg
gattctagaagatatatgaactcacacatggataggcaatttacagacacaccttataga
gaatcaacttttagggattctagttatgttcccaattttcagagaccactatcaagaaag
aatgtcacgggtaggagtacgtcttcaagcaggaggagaagttttgatgatagccatctt
cctctaggggagacaccaagttttgtggaaggtccaggttctcttcttgaggctctaggt
gagggactaagtccaacttctgactggtgtgctagagttgctgctttcaactatgtaaga
tctctcctgcagcaaggtccaagtggtattcaggacattgttcaaagttttgaaaaggtg
atgaaacttttttttaaacatttggatgatcctcaccataaggttgcacaggcagctctt
ttaactcttgcagagataataccctcttgtagaaagccttttgaaagttacatggaaagg
attctgccacatgtattttcccggttgattgatccgaaagaggtagttaggcaaccttgc
tcgacaacattggatattgtgggcaaaacttatggggtggattctctgttgccagcattg
cttcgttcacttgatgaacaacgatcacccaaagcgaaattagcggtaattgaatttgca
attggctcttttaacaagcattctgttacttctgaaggtgctggtaacattggcatattg
aagttgtggcttgctaaattgacacctcttgttcatgataaaaatactaaactgaaggaa
gctgctatttcgtgttttatatcagtttttacccgctatgatcccacaaatgtactgaat
tttatccttagcttatctgttgaagagcaaaattccttgaggcgagcgctcaaacagtat
acacctcgtatagaagtggatttgatgaacttcttgcagagtaagaaagagcgacagcgt
tcgaagactgcttatgatccatctgacattgtagggacatcttctgaagagggctatatg
ggagtatcaaagaaaactaactattttggaagattttctgctaactcccctgacagtgat
ggaggtaggagatggaattcaatgcaggattcaacatactcaagtggccgtatcaatcaa
gccactactgaagaaacgcatgggaacctgtatgatagtcttgactgtggaactagtaat
gatattctggattcaagaatcaaagataagtatattggaaatcatactggtgaaagtgtt
ggaggttggaccagccgattggaaaatatggaaaaaagtgacaatccagcttttttatct
acatcacgtgtggacattaatgtacttcaaaagagttctgatagtattggagtaagcgca
gggttgcagcctgaaaatggtttcccagatgagttggctacagaccataccaaaactgga
atcttgaagactgtctcgaattcagaaactggtccaagcattcctcaaattctccactca
atttgtaacgggtttgaaggaagtccagctgatatcaagcaaaatgcaattcatcagtta
attgaagcatctgtttctaatgacccctccgtatggagcaagtatttcaatcagatttta
acgactgtacttgaggtgctagatgatcccgattcctctgttagagaatttgttctgttg
ctgatagctgaaatgctaagaaatcagaaagaagccatggaagattctgttgaaatcgtt
atggaaaagctgcttcatgtatctaaggatactgttcccaaggttgctaatgaagcagag
aactgcttgacaaccttgttggcccagtatgacccatttagatgcttgagtgtaattgtt
cctcttttagtcacagaggacgagaagactcttgttgcctgcataaattgtttgacgaag
cttgtgggcaggttatctcaagagcaactggtgacacagttgccctctttcttgccagct
ctttttgatgcatttggaagtcaaagtgctgatatccgcaagacagttgtattttgtcta
gttgacatctatatcatgctcgggaaagaattcctgccatacctggagggactcaatagt
acccaattgcgtttggtgacgatttatgctaaccgtatctcacaagctagaacaggagcc
ccaatagatgctggccaatga
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integrated database retrieval system
