Spinacia oleracea (spinach): 110797053
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Entry
110797053 CDS
T05137
Name
(RefSeq) cell division control protein 48 homolog A-like
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
soe
Spinacia oleracea (spinach)
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
110797053
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
soe03019
]
110797053
03009 Ribosome biogenesis [BR:
soe03009
]
110797053
04131 Membrane trafficking [BR:
soe04131
]
110797053
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
soe04147
]
110797053
Messenger RNA biogenesis [BR:
soe03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
110797053
Ribosome biogenesis [BR:
soe03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
110797053
Membrane trafficking [BR:
soe04131
]
SNARE
SNARE associated proteins
Others
110797053
Autophagy
Aggrephagy
Other aggrephagy associated proteins
110797053
Exosome [BR:
soe04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
110797053
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
CDC48_2
AAA_16
AAA_2
AAA_5
AAA_14
AAA_22
AAA_33
TIP49
RNA_helicase
NPHP3_N
AAA_28
Parvo_NS1
Mg_chelatase
nSTAND3
AAA_17
IstB_IS21
AAA_7
AAA_18
ATPase_2
ABC_tran
Vps4_C
DUF815
AAA_24
ResIII
NB-ARC
AAA_lid_PRS2_C
TsaE
Viral_helicase1
Sigma54_activat
SLFN-g3_helicase
NACHT
DAAP1
UFD1_N2
Motif
Other DBs
NCBI-GeneID:
110797053
NCBI-ProteinID:
XP_021857843
UniProt:
A0A9R0K4V9
LinkDB
All DBs
Position
5:complement(6439841..6445325)
Genome browser
AA seq
810 aa
AA seq
DB search
MANPTPSDHAKPSSSKSDKNYSTAILERKKAPNRLVVDEAVNDDNSVVTISPASMDELDL
FRGDTVLIKGKKRKFTACVVLGDEQCEVSKIRMNKVVRANLRVRLGDVVSVHQCNNLQFG
KRVHILPIDDTIEGVTGNLFDAYLKPYFMEAYRPVTKGDLFLVRGGMRSVEFKVVETEPA
EMCIVSPDTEIFCDGEPIRREDEERLNEVGYDDVGGVRKQMAQIRELVELPLRHPKLFSS
IGVKPPKGILLYGPPGTGKTLIAKAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEE
AEKNAPSIIFIDEIDSIAPKRDKTNGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNS
IDPALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLAEDVDLEKVSKETHGYVGADLA
ALCTEGALQCIREKMDVIDLEDETIDAEVLNSMAVTNEHFQTALGSSNPSALRETVVEVP
NVSWEDIGGLETVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIA
NECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGGSGGD
AGGAADRVLNQMLTEMDGMNAKKTVFVIGATNRPDIIDSALLRPGRLDQLIYIPLPDESS
RLQIFKSCLRKSPVSKDVDLTALARYTNGFSGADITEICQRACKYAIRENIEKDIEKEKK
RSEHPESMEDDESEEVSEIKAAHFEESMKYARRSVSDADIRKYTSFAQTLQQSRGFGTEF
RFATNQSATAAANATTSAEATYDGDDDLYD
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atggctaatcccactccttccgatcacgccaagccctcttcttcgaaaagtgacaaaaac
tactctactgcaattcttgagcgtaaaaaggctccaaaccgcctcgtcgttgatgaagca
gtcaacgatgacaactctgtggttaccatcagccctgcatccatggatgaacttgaccta
tttcgaggagatacagtcttaattaagggaaagaaaaggaagtttacagcatgcgttgtg
ttgggagatgagcagtgtgaagtatccaaaatcaggatgaataaagttgtgagggcaaat
cttcgagttcgccttggagatgttgtttctgtacaccaatgcaacaatttgcagtttggt
aaaagagttcatattttaccaattgatgatactattgagggtgttactggcaacctgttt
gatgcttatttgaagccatactttatggaagcttatcgtccagttacaaaaggtgatctt
ttccttgtaaggggaggaatgcgaagtgttgaattcaaagttgtcgaaactgaacctgca
gaaatgtgtattgtatctcctgataccgagatcttctgtgatggtgagcctattagacgt
gaggatgaagagagattaaacgaggttggttatgacgatgttggtggtgtaaggaaacaa
atggctcaaatccgtgaacttgttgaacttcctcttagacacccaaaactcttctcttca
atcggtgttaaacctccaaaaggaatcctactctacggaccacctggtactggaaaaacg
cttattgccaaagctgttgctaatgaaactggagccttcttcttcttgattaacgggcca
gaaatcatgtcaaaaatggctggagaaagtgaaagcaatttgaggaaggcattcgaagaa
gctgagaagaatgcaccttctatcattttcattgatgagattgattccattgctcctaag
agagataagactaatggtgaagttgaaaggcggattgtttctcaattgttgactttgatg
gatggtcttaagagccgtgctcatgttattgttatgggtgctactaatcggcctaatagt
attgatcctgctcttagaagatttgggagatttgatcgtgagattgacattggtgttcct
gatgaagttgggaggttggaagttctccgcatccacaccaagaatatgaaacttgcagaa
gatgttgatcttgaaaaagtatcaaaggaaacacatggttatgtgggtgcagatcttgct
gctctttgcacagaaggagctcttcagtgtattagggagaaaatggatgtcattgactta
gaagacgagacaattgatgctgaagtgttaaactctatggctgttacaaatgaacacttc
caaactgccctgggatcttccaacccatccgccctgcgtgaaacagttgtggaggttcct
aatgtttcatgggaggatattggtggtttggaaactgtcaaaagagaacttcaagagact
gtgcaatacccagtggagcatccagagaagtttgagaaatttggaatgtcaccttccaaa
ggtgttctcttctacggtcctcctggttgtgggaaaacattgcttgcaaaggcaattgct
aatgaatgccaagccaacttcatcagcgtaaagggaccggagttgctgactatgtggttt
ggagaaagtgaggcaaacgtgagagaaatttttgacaaggctcgtcaatcagctccttgt
gttttgttttttgacgaacttgactccattgctactcagcgtggcgggtcaggtggagat
gccggtggagcagctgatagagtgttgaaccaaatgttgaccgagatggatgggatgaac
gctaagaaaacagtttttgtgataggagctacaaacagaccagacattattgactctgca
ttgctaagacctggaagacttgatcagttgatctatatccctcttcctgatgaaagttcc
cgccttcagattttcaagtcttgtttgaggaaatcgccagtttctaaggacgttgacctt
actgctcttgctcggtatacaaatggtttcagtggtgctgatattactgaaatctgtcaa
cgtgcctgcaaatatgccatcagagaaaacattgagaaggatattgagaaggagaagaag
agaagtgagcaccctgaaagtatggaagacgatgaaagtgaagaggtgtctgagattaag
gcagcacactttgaagagtcgatgaagtatgcacgaagaagtgtcagcgatgcagacatt
aggaaatacacgtcgtttgcacaaacgttgcagcagtctcgcgggtttggtactgaattc
cgttttgccacaaatcagagtgcaactgctgctgctaatgcaaccacttctgctgaagcc
acttatgatggtgatgatgatttatatgattag
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