Spinacia oleracea (spinach): 110797761
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Entry
110797761 CDS
T05137
Name
(RefSeq) replication factor C subunit 3
KO
K10756
replication factor C subunit 3/5
Organism
soe
Spinacia oleracea (spinach)
Pathway
soe03030
DNA replication
soe03410
Base excision repair
soe03420
Nucleotide excision repair
soe03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
110797761
03410 Base excision repair
110797761
03420 Nucleotide excision repair
110797761
03430 Mismatch repair
110797761
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
soe03032
]
110797761
03036 Chromosome and associated proteins [BR:
soe03036
]
110797761
03400 DNA repair and recombination proteins [BR:
soe03400
]
110797761
DNA replication proteins [BR:
soe03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
110797761
DNA Replication Termination Factors
ELG1-RFC complex
110797761
Chromosome and associated proteins [BR:
soe03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
110797761
DNA repair and recombination proteins [BR:
soe03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
110797761
Check point factors
HRAD17(Rad24)-RFC complex
110797761
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
RCF1-5-like_lid
AAA_lid_RFC1
AAA_22
AAA_11
AAA_assoc_2
AAA_16
ATPase_2
AAA_14
AAA_5
AAA_30
DUF815
RuvB_N
DNAX_ATPase_lid
AAA_7
bpMoxR
nSTAND_NTPase5
AAA_24
ResIII
AAA_19
AAA_3
nSTAND3
SLFN-g3_helicase
Mg_chelatase
MCM
DUF3086
TIP49
AAA_2
AAA_18
AAA_28
nSTAND6
AAA_25
RNA_helicase
Motif
Other DBs
NCBI-GeneID:
110797761
NCBI-ProteinID:
XP_021858598
UniProt:
A0A9R0IZL3
LinkDB
All DBs
Position
2:complement(112882195..112888911)
Genome browser
AA seq
363 aa
AA seq
DB search
MAETISLMDVDEGDNDTIPKPLIKPNKGKNVVAPGDGRSTLWVEKYRPQSLADVAAHRDI
IDTIDRLTSENKLPHLLLYGPPGTGKTSTILAVARKLYGNQFHNMILELNASDERGIDVV
RQQIQDFASTQSFSFGSKAHVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICNNV
NKVISALQSRCTRFRFAPLDSIHVNERLKHVIEAEGLDVTESGLAALVRLSTGDMRKALN
ILQSTHMASSQITEEAVYLCTGNPLPKDIEQISYWLLNEPFSTSFSRISEIKTRKGLALV
DIIREVTMFVFRIRMPADVRVQLINDMADIEYRLSFGCSDKVQLGSLIASFTKARSALVA
AAK
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaacaatctctctcatggacgtcgatgagggcgacaacgacaccatccccaaa
cctttaatcaagcctaacaaaggcaaaaatgtcgtcgctcccggcgacggaagatccacc
ctatgggtcgaaaagtaccgtcctcagtccctcgccgacgttgcggcacatcgtgacatc
attgataccattgacagactgacgagcgagaataaattgccgcatttgctgctttacgga
cctccaggaacagggaaaacgtcgacaattttggcggttgcgaggaagctttatgggaat
cagttccataacatgattctcgagcttaatgcttctgatgaacgcggtatcgatgttgtt
cgtcagcaaattcaggattttgccagcacacagagtttctcctttggttcaaaggcacat
gtgaaattagttttactggatgaagcagacgcgatgacaaaggatgcacagtttgcttta
cggcgagtgattgagaaatacacaaaaagcacgagatttgcgctaatctgtaacaacgtt
aacaaggtcatttcagcactccagtcaagatgcactcgcttccggtttgctcccctggat
tctatccatgtcaatgagcggcttaagcatgttatagaggctgaagggcttgatgtaact
gagtcaggcttagctgcacttgttcggttgagtactggggatatgcgaaaggctttaaat
attttacagtcaacgcacatggcgtcatcgcaaataacagaagaagcagtttacctgtgc
accggaaatcctctgcctaaggatattgagcagatatcatactggcttctcaatgagcct
ttttctactagcttcagccgaatttctgaaattaagaccagaaaaggattggcgttggta
gacatcataagagaagtaacaatgtttgtttttagaatcagaatgccggctgatgttcga
gttcaactgataaatgatatggctgatatagagtatagactaagttttggatgcagtgac
aaagttcagcttggatctcttattgcctcattcacaaaggctcgctctgcattagtcgcg
gctgcaaagtag
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integrated database retrieval system
