Spinacia oleracea (spinach): 110798109
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Entry
110798109 CDS
T05137
Name
(RefSeq) ATP-dependent DNA helicase 2 subunit KU80
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
soe
Spinacia oleracea (spinach)
Pathway
soe03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
110798109
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
soe03400
]
110798109
DNA repair and recombination proteins [BR:
soe03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
110798109
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ku
Ku_PK_bind
Ku_N
Ku_C
Motif
Other DBs
NCBI-GeneID:
110798109
NCBI-ProteinID:
XP_021858943
UniProt:
A0A9R0J093
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Position
2:101551517..101568130
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AA seq
709 aa
AA seq
DB search
MARNKESLVLLLDVGPKMHGVLPQVEKVCAMLLEKKLIYNKFDEVGIVLFGTAETNNELT
KEVGGYENVVVLEGIKVVDGDLVDVLDQIPRGTVPGDFLDAIVVGMDMLIKKFGPTNKGK
KRLCLITNALSRLRDPYEGTKEDQVSTIAQQMTEQAIKLECVVVRGELSGDADKNVMDEN
DQLLELFTKKTWAKTLHVESPTSLLGALRTRSIAPVTIFRGDLEVSSGLKIKVWVYKKTS
EERFPTLKKYSDKAPATDKFATREIKVDYEYRSIQDPEKVVPPEQRIKGYRYGPEVVPVS
SDAWEAVKFKPEKSVKLLGFTDAKNILRQYYMKDVNIFIAEPGKKEAVTAVSALARAMKE
MNKVAIVRCVWRQGQAGVAIGVLTPNVSVKENIPDSLYFNLLPFAEDVREFQFPSFKNLP
ATFQPTEEQQEAADNLVMMLDLAPPAKQENLKPDLTPNPVLERFYHFLNLKAKDPDATVP
SLDEALKRIAEPDTELLSQNKSVIDEFQRCFELKENLKKKKSTRSFKEKPSGSDDEKEVI
EDHNEGKTLMITDDITAVKVENSDEKPYSALTTNSAAIVEKIGDITPVQDFEAMLSRRDS
PDWIAKGIKGLKSKILEFVEDSFAGNNYNKAIECLVALRKGCVLEQEPKQYNDFVQYLCR
FCRGHDLNDFCELLGLKGMTLITKSEAVDSDVPDEEARSFLVTKDGKVE
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atggctcgcaacaaggaatcactagttttgttgcttgatgttggtccaaaaatgcacggt
gttcttccacaagttgagaaagtttgtgccatgcttttggagaagaagctcatttataac
aagtttgatgaagtgggaattgtcttatttggaactgcagaaacaaacaatgagctcact
aaagaagtaggcggatatgaaaacgtcgtggttctggagggtataaaagttgtagatggg
gatctggttgacgtactggatcagattccacgagggactgttcctggtgattttcttgat
gcaattgttgttgggatggatatgctgataaagaagtttggaccaactaacaagggaaag
aaacgtctttgcctaatcacaaacgcgctctctcgtctgagagatccatatgaaggaact
aaagaagaccaggtcagcactattgctcaacaaatgactgagcaggcaataaaattggaa
tgtgtagtagttagaggggagctaagtggtgatgctgataagaatgttatggatgagaat
gaccagctattagaacttttcacaaagaaaacttgggcaaagactcttcatgtagaaagc
ccaacttcacttttaggagcactcaggactaggagcatagcccctgttacaatattcagg
ggtgatcttgaagtaagctctggactgaagattaaggtttgggtgtacaagaaaacatcc
gaggaaagatttccaaccctgaagaagtattcagataaagcacctgcgactgataagttt
gccacccgtgaaatcaaagtggactatgaatatagaagcattcaagatcctgaaaaagtt
gttcctccagaacaaaggattaagggttatcgttatggaccagaagtcgtccccgtctca
tctgatgcatgggaagctgtcaaattcaaaccagagaagagtgtgaagctccttggattc
actgatgccaaaaacatactacgccaatattacatgaaagatgtcaacatattcattgct
gaacctggcaaaaaagaagctgttactgcagtttctgctttagctagagcaatgaaggaa
atgaataaagtagcgatagttcgatgtgtttggcggcaaggacaggcaggtgttgcgatt
ggggtattgacgccaaatgtttctgtaaaggaaaatattcctgattcattgtacttcaat
ttacttccgtttgctgaggatgttcgagagttccaatttccttctttcaaaaatctccct
gcaacatttcaaccaactgaagaacagcaggaggctgctgataatctagtaatgatgctt
gaccttgcaccacctgccaaacaggagaacctaaagccggatttgacaccaaatcctgtt
cttgagcgattttatcactttctcaatctaaaagcaaaagacccagatgctactgtgcct
tcactagatgaagccttgaagagaatagccgagcctgatacagaattgctttcgcaaaac
aagtctgtcattgatgaatttcaaagatgctttgaattaaaggagaacttgaagaagaag
aaatcaactaggtcattcaaggagaagccatctggatcagatgatgagaaagaggttata
gaagaccataacgaggggaaaacattaatgatcactgatgatattactgcagttaaggtt
gagaatagtgatgaaaaaccatacagtgctctgacaactaattctgctgccattgttgag
aagattggggacattaccccagtccaagactttgaagctatgttatctcgtagagatagc
ccagattggattgctaaaggaatcaaaggtctaaaaagcaaaattcttgaatttgtagag
gactcgtttgcaggaaataactataacaaggcaatagagtgtcttgttgctctccgaaaa
ggatgtgtccttgaacaggaacccaaacaatacaacgattttgtacagtatctttgtaga
ttctgcaggggacatgacctgaatgatttttgtgagctccttgggttaaaagggatgaca
ttaatcacaaagtcagaggccgtagacagtgatgttccagatgaagaagcaagaagtttt
ctggttaccaaagatggcaaggttgaataa
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