Spinacia oleracea (spinach): 110798134
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Entry
110798134 CDS
T05137
Name
(RefSeq) nibrin homolog isoform X1
KO
K10867
nibrin
Organism
soe
Spinacia oleracea (spinach)
Pathway
soe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
110798134
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
soe03032
]
110798134
03400 DNA repair and recombination proteins [BR:
soe03400
]
110798134
DNA replication proteins [BR:
soe03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
110798134
DNA repair and recombination proteins [BR:
soe03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
110798134
BRCA1-C complex
110798134
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FHA
BRCT
Nbs1_C
Yop-YscD_cpl
PTCB-BRCT
Organ_specific
Motif
Other DBs
NCBI-GeneID:
110798134
NCBI-ProteinID:
XP_021858975
UniProt:
A0A9R0K675
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Position
6:complement(135052775..135073831)
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AA seq
542 aa
AA seq
DB search
MVWGLFPVNPLSGEEKYYIYTKGTFKVGRKGCDVICNDKGVSRIHAEIIVEAMESLEPIE
NRSSRLTSKVRIKDSSKYGTFIVRNSGIKEKVHDCPGKETYLKDGDTVKFGTGDLTYRFS
YVPLIFYLCNFTSSQGVPFTQDKISSIGARVAHKWTTECTHVIVDPFMPVNEEIIDIILS
KKPLIPSTWLEIVAGTRINNEIPSYSQYVPTLTLDGESVMVADTRTRENCLKGYTFALDS
ANEYRFQDRVQRLLEIAGAKVLSIKNSISQDRVVLVIPADSAERFCQNSTLSKINEIKLI
VAVISGYLDPSILVSSPIVVLSSCSTDETVVADSDAEAETATSDHITMTNAVVGHASDES
ERKTVNKHTGSLSEDALLTDLLLQNNTKTVRGKEATERKNIDKKSANQGDSNVQRFFEPK
REVTIARNNDLKSSNSDILYSQNLIVRGTNIQVSTGTVADGGVVNFKRFRKTDIQSGNSF
SNFVSFSKYPYTDSDYDKEVSEYVKDEKRRKQMESMAEDLFNTERGRRRGVAGSIQGLLS
RS
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggtctgggggctctttcctgttaacccactttcaggggaagagaagtactatatatac
acaaagggaacattcaaagtgggaaggaaagggtgcgatgtaatatgcaatgataaaggt
gtctcacgtatacatgctgagatcattgtagaagcaatggaatctttggaacctatcgag
aacagatcatctagattaacctctaaagttcggataaaagattcctccaagtatggaaca
tttattgtaagaaattctggcataaaggaaaaagttcatgattgccctggcaaagaaaca
tatttgaaagatggggacacggtaaaatttggcaccggggatctgacatatagattttcg
tatgtcccgctaattttctacctttgcaatttcacaagctcgcaaggagttcctttcact
caagataaaatatcctctataggtgctcgtgttgcacataagtggacaacagaatgcacg
catgtaattgtggatccattcatgcctgtgaacgaggaaataattgatatcattttgtct
aagaaaccactaataccaagtacttggttggagattgttgcaggaactaggataaacaat
gaaattccaagttacagtcaatacgttccgactttgactttggatggtgaatctgtgatg
gtagccgataccaggactcgtgaaaattgtttaaaaggatacacttttgcgttggattct
gcaaatgagtatagatttcaagatagggtgcaaaggttgttggaaattgctggtgcaaaa
gttctttctattaaaaattcaatcagtcaggaccgagtggtgcttgtaatccctgctgat
tcagctgagcgattctgccagaacagcacgctgtctaaaataaatgagatcaaattgatt
gttgcagttatatcagggtatcttgatccatcaatccttgtgtcgtcacccatagtagtt
ttgtcttcatgctcaacagacgagacagtggtagcagactctgatgcagaagcagaaact
gcaacctcagatcatataactatgactaatgcagtagttggacatgcaagtgatgagagt
gaaaggaaaacagttaataaacatactggttctctgagtgaagatgctctacttacagat
ttattgctgcagaataatacaaaaacagtcagaggaaaggaggctactgaacgcaaaaat
attgacaagaaatctgcaaatcaaggagacagtaatgttcagaggttttttgagccaaag
agggaagtaaccattgccaggaacaatgatttgaaaagttcaaactcagatattctttat
agccaaaatttaattgtcagaggtactaatatacaagtctcaactggtactgtggcagac
ggtggagttgttaatttcaagcgatttagaaagactgatattcagtcggggaatagcttt
agcaacttcgtgtcattttcaaaatatccatatactgattctgactatgataaggaagta
agtgaatatgtgaaggacgagaaaaggaggaagcagatggagtctatggcggaggacttg
ttcaacactgaaagggggcggcgtcgtggagttgctggttctattcaaggacttctgagt
cgtagctga
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