Spinacia oleracea (spinach): 110798190
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Entry
110798190 CDS
T05137
Name
(RefSeq) ubiquitin C-terminal hydrolase 12-like
KO
K11838
ubiquitin carboxyl-terminal hydrolase 7 [EC:
3.4.19.12
]
Organism
soe
Spinacia oleracea (spinach)
Pathway
soe03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
110798190
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
soe01002
]
110798190
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
soe04121
]
110798190
Enzymes [BR:
soe01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
110798190
Peptidases and inhibitors [BR:
soe01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
110798190
Ubiquitin system [BR:
soe04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
110798190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP7_ICP0_bdg
UCH
USP7_C2
MATH_2
MATH
UCH_1
SASP
ubiquitin
Nitroreductase
Motif
Other DBs
NCBI-GeneID:
110798190
NCBI-ProteinID:
XP_021859049
UniProt:
A0A9R0J0Q2
LinkDB
All DBs
Position
6:134642632..134665988
Genome browser
AA seq
1116 aa
AA seq
DB search
MTMMTQPPLDQEDEEMLVPHSDVVVEGPQPMEAVSADANNVAENQAVEEPPTSKFTWTIE
NFSRINTKKHYSDAFAVGGYKWRILIFPKGNNVDYLSMYLDVADSPALPYGWSRYAAFSL
LVVNQAHQKYSIRKETQHQFNARESDWGFTSFMPLSDVYDPSRGYLVNDTLVIEAEVAVR
RVMDYWSYDSKKETGCVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDNPTNSI
PLALQSLFYKLQYNDTSVSTKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGTVV
EGTIQQLFEGHHMNYIECVNVDYKSTRKESFYDLQLDVKGCRDVYASFDKYVEVERLEGD
NKYHAEQHGLQDAKKGVLFLDFPPVLQLQLKRFEYDFVRDTMVKINDRYEFPLELDLDRE
NGKYLAPGADKSVRNLYTLHSVLVHSGGVHGGHYYAYIRPTLSDQWFKFDDERVTKEDLK
KALEEQYGGEEELPQTNPGFNNAPFKFTKYSNAYMLVYIRESDKDKVVCNVDEKDIAEHL
RTRLKKEQEEKEDKRRYKAQAHLFTIIKVARDDDLAEQIGKDIYFDLVDHDKVRSFRVQK
QMIFNQFKEEVAKELGIPVQFQRYWIWAKRQNHTYRPNRPLTPVEETQAVGQLREASNKM
HNAELKLFLEVEIGLDLHPIAPPDKTKDEILLFFKLYDPEKEELRYVGRVFVKSTGKPAD
IFNKLNEMASFAPDEEIELFEEIKFEPCVMCEPLDKRLSFRLSQLEDGDIICYQKVPPID
SEDQYRYPDVPSFLEYVHNRQVVHFRSLERPKEDDFCLELSKINTYDEVVERVAQRLSLD
DPSKIRLTSHNCYSQQPKPQPIKYRGVDHLSDMLVHYNQTSDILYYEVLDIPLPELQGLK
NLKVAFHHTTKDEVVIHNIRLPKQSTVGDVIDELKTKVELSHPDAELRLLEVFYHKIYKI
FPCSEKIENINDQYWTLRAEEIPEEEKNLDPNDRLIHVYHFTKDTAQNQMQVQNFGEPFF
LVIREGETVAEIKVRIQKKLHVPDEEFSKWKFAFLSLGRPEYLQDIDIVSSRFQRRDVYG
AWEQYLGLEHTDTTPKRAYTANQNRHSYEKPVKIYN
NT seq
3351 nt
NT seq
+upstream
nt +downstream
nt
atgactatgatgacccagcctcccttggatcaggaggacgaggagatgctcgtgccccat
tctgatgtcgtcgtcgaaggtcctcagcccatggaagctgtatcagcagatgctaataat
gtggccgagaatcaggccgtggaggagcccccaacttctaaatttacatggactattgag
aatttctctagaataaacactaagaagcactactctgatgcttttgctgttggtggttat
aaatggcggatcttgattttcccaaaagggaataatgtggactatctgtcaatgtatctt
gatgttgcggattctcctgctttgccatatggttggagtagatatgctgcttttagtctg
ttagtggttaatcaagctcatcagaagtactcaataagaaaagagacgcaacatcagttt
aatgctagagagagcgattggggttttacatcttttatgcctctcagcgatgtatatgat
ccttcgaggggatatcttgtcaatgatactctggtgatagaagctgaggttgccgttcgt
cgtgtaatggattattggtcatatgactcgaagaaagagacgggctgtgttggactcaag
aatcagggagcaacttgctacatgaattcccttctgcaaactttgtatcatattccctat
ttcagaaaggctgtctaccatatgcctacaactgagaacgataatcctactaatagcatc
ccgttggctttgcaaagtttattctacaagcttcaatataatgacacaagtgtctcaacc
aaagaattaaccaagtcttttggatgggacacttatgattctttcatgcaacatgatgtg
caggagctcaatagagttttgtgtgagaagcttgaagataagatgaagggaactgttgtg
gagggaactattcaacaattgtttgaagggcatcatatgaactatattgaatgtgtcaat
gtagactataaatccacgaggaaggaatcgttttatgatcttcagctggatgtcaaaggc
tgtcgggatgtgtatgcttcatttgataagtatgtggaagttgaacgtctggaaggcgat
aacaagtaccatgctgagcaacatggtttacaggatgctaagaaaggtgttctattcctt
gatttccctccagtgcttcagctccaactcaagaggtttgaatatgactttgtaagggac
accatggtaaagatcaatgatcgttatgagtttcctctcgagcttgaccttgacagggaa
aatgggaaatatttagcccctggagcagataagagcgttcgaaacctatatacacttcac
agtgttttggtacatagtgggggagtccatggtggacattattatgcatatataaggcca
acactatctgaccaatggttcaaatttgatgatgagcgggtgactaaagaggatttgaag
aaggctttagaagagcagtatggcggtgaagaagagttgccgcagacaaatccggggttt
aataatgctcctttcaagtttacaaaatattcaaacgcttacatgcttgtgtatatacgt
gaaagtgacaaggacaaagtagtttgtaatgtggatgagaaggacattgcagagcatctt
aggacaagattgaagaaggagcaagaagagaaggaagacaagaggcggtacaaagcacag
gcacatctttttactatcataaaggttgcccgagatgatgatcttgcagaacagatcgga
aaggacatttattttgatcttgtggatcatgacaaagttcgcagtttccgtgtacagaag
cagatgatatttaatcaattcaaggaggaggttgccaaagaattaggtatacctgttcaa
tttcagcgatattggatctgggcgaagcgccagaaccacacatatcgtcctaatcgacct
ctgacgccagtggaagaaacccaagctgtggggcaactgagagaggcatcaaataagatg
cacaatgcagagttgaagttatttctggaagtagagatagggttggatcttcacccaatc
gctcctccagataaaacaaaagatgaaattttgctctttttcaagctttatgatcctgaa
aaggaagaactccgatatgtaggcagggtttttgtcaaaagcactggtaaaccagctgat
atttttaacaaattaaatgagatggctagctttgctccggatgaggagattgaactcttt
gaggaaatcaagtttgaaccatgtgtcatgtgtgagccccttgacaagaggctgtcattt
aggttgagccagttggaagatggtgacatcatctgctaccagaaagttcccccaattgat
agtgaggatcagtatcgttatcctgatgtaccgtcattcttagagtatgttcacaatcgt
caggttgtccattttcgatccctagagaggcccaaagaagatgatttctgcctagaattg
tcaaaaataaatacttatgacgaagttgttgaaagagttgctcagagactcagtcttgat
gatccttcgaagattaggctgacgtctcataattgctactctcagcagcctaaaccacag
cctatcaagtatagaggagtagatcatctgtctgacatgctggttcattacaatcagact
tctgatatcctgtattatgaagtacttgacattcctttgccagaattgcaaggactaaaa
aatcttaaagtagcttttcatcataccacaaaagatgaggtggtaattcacaatattaga
ctaccaaagcaaagtaccgtaggagatgtaattgatgagctaaagacaaaggtggaattg
tcacatccggatgcagagctcagattacttgaagttttctaccacaagatctacaagatt
tttccatgtagtgaaaagattgaaaatataaatgaccagtactggacattgcgtgcagag
gagatccctgaagaagaaaagaaccttgaccccaatgatcgtttgattcatgtctaccat
ttcaccaaggacaccgcacaaaatcagatgcaagtgcagaactttggggaaccctttttc
ttggttattcgtgaaggtgaaacagtagctgaaattaaagtgagaatacagaagaaattg
catgttcctgatgaagagttttccaagtggaaatttgcatttttgtcactgggccggcca
gagtatttgcaagatattgacattgtatccagccgttttcagaggagagacgtttatggt
gcctgggaacagtacctggggttggaacatactgatactactccaaagagggcatacaca
gcaaatcagaatcgtcactcatatgagaagccagtaaaaatttacaactga
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integrated database retrieval system
