Spinacia oleracea (spinach): 110798605
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Entry
110798605 CDS
T05137
Name
(RefSeq) serrate RNA effector molecule
KO
K27103
serrate RNA effector molecule
Organism
soe
Spinacia oleracea (spinach)
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
soe03019
]
110798605
Messenger RNA biogenesis [BR:
soe03019
]
Eukaryotic type
mRNA processing factors
Other processing factors
110798605
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARS2
SERRATE_Ars2_N
Motif
Other DBs
NCBI-GeneID:
110798605
NCBI-ProteinID:
XP_021859487
UniProt:
A0A9R0J2I1
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Position
5:complement(32109832..32119246)
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AA seq
747 aa
AA seq
DB search
MAEVLNMPVEPIDNRRRNKDKPDEPPTDSSPPPPPPPPNRRRDRDSRERRDDRDFDRPPP
NRYYDRNNRGGGGGGGERDRDYNNNNNNKRNRGLSPSPPHPPPPYRDNRRNNYSPPPRRS
PPYPPFKRSRRDEGGYDGRRGSPRGGGYGPGDRRFGYDHPGGYDREMGGRPGYADDRPHG
RFRSGGYPGGPSDWDSGRGGYGDSSNPGNAQREGLMSYKQFIQELEDDVLPAEAERRYQE
YKSEYISTQKRTYFESHKDEDWLKNKYHPANLLTVIERRNELARKVAKDFLLDLHSGSLD
MGPSANASTMNKSGQTSEPNSEDETDVNGKRRRHGRAQAKEADISAAPKAHLVSSEPRRI
QIDIDLAQALVTKLDSEKRIEDNILSKDDTDKMSRDRSHSGSIGPVIIIRGLTSVKGLEG
IELLDTLATYLWRVHGVDYYGMIETAEPKGLRHVRAEGKNSDVSTNAAEWEKKLDSHWQD
RLRSLDPLEVMTAKEKIDAAAVEALDPFVRKIRDEKYGWKYGCGAKSCTKLFHAAEYVHK
HLKLKHPELSIDATTKVREEIYFQNYMNDPNAPGGQPVMQQFVPKDKLQRRRPGADNRLK
DDRGNRRERDRNGGERFERPENPQADFPPNKDGPDKGNSDEPIFDNFGGQGMHVAPFATD
IAPPPVLMPVPGAGPLGPFVPAPPEVAMRMLREQGGPSPFEGPGRNGMGAPPIILPPSFR
QDPRRLRSYQDLDAPEDEVTVIDYRSL
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagtgctgaacatgcccgtcgaacccatcgataatcgccgtcgcaacaaagac
aaacccgacgaacctcccaccgactcttccccccctccaccaccaccaccacctaaccgc
cgccgagatcgcgattctagagagagaagagacgaccgagatttcgatcgtcctccacct
aatcgctactatgatcgcaataatcgaggtggtggtggaggaggaggagagagagacaga
gattacaacaacaacaacaacaacaagcgaaatagaggacttagccctagccctcctcat
cctccccctccttaccgagataaccgacgtaataattattctccccctcctcgacggtct
cctccttatcctccatttaagcgttcgagacgagacgaaggtggatatgatggaagaaga
gggagcccccgtggtggcggttacggccccggtgatcgaaggtttggctatgatcaccct
ggtgggtatgaccgtgaaatgggaggcaggccaggttatgcggatgataggccgcatggt
cggtttcgttccggtggctatcctggtggcccatctgattgggattccgggcgtgggggt
tatggtgactcgtcaaatccagggaatgctcagagagaaggtttgatgagttacaagcaa
tttattcaggaacttgaagatgatgtgttaccagcagaagcggagcgtaggtatcaggag
tacaagtcagagtacatttcaactcaaaaacgtacatactttgaatctcacaaagatgaa
gactggttgaagaataaatatcaccccgcaaatttattgactgtcatagaaaggaggaac
gaacttgcacgcaaagttgcaaaagattttttgttggacttgcacagtgggagccttgat
atgggtcctagtgcaaatgcctcaaccatgaataaatcaggccagactagtgaaccaaac
tctgaggatgagacagatgttaatggtaaacggaggcgccatggtcgagctcaggcgaag
gaagctgatatatcagctgcccctaaggctcatcttgttagttccgagccaagacgaatt
cagatcgatattgatttagctcaagcacttgtcacaaaacttgactctgaaaagcgaatt
gaggacaatatcttatccaaagatgatactgacaaaatgagtagagatagatcacacagt
ggatcaattggtccagttattatcatacgcggattaacttctgttaagggtcttgagggc
attgagcttctagatactcttgcaacttacctttggcgtgttcatggggttgattattat
ggcatgattgaaactgcagaacctaagggcctccggcatgtgagagccgaggggaaaaat
tctgatgtttctactaatgctgcagaatgggaaaagaagctcgattcccattggcaagac
aggttgcggagtctggatccacttgaggtcatgactgcaaaggaaaagatagatgctgcc
gctgttgaagctttggatccttttgtgagaaaaattagggatgaaaagtatgggtggaag
tatggttgtggtgctaagagttgcacaaagctcttccatgctgctgaatatgtccacaag
catttgaaacttaaacatccagaactctcgatagatgctacaaccaaagtacgagaagag
atatacttccagaactacatgaatgatccaaatgctcctggtgggcaacctgtcatgcag
caatttgtaccgaaagacaagctgcaaagacgaagaccgggagcagacaaccgtttgaaa
gatgatcggggtaaccgtagagaaagagaccgaaatggtggtgagagatttgaaagacca
gagaatcctcaggctgatttcccgcccaacaaagatggcccggacaagggcaactccgat
gaaccaatttttgataattttggcggacagggcatgcatgttgcacccttcgcaactgat
attgcacccccacctgtattgatgcctgttcctggtgctggtccactgggaccttttgtg
ccagctcctcccgaagttgcaatgcggatgctacgtgagcagggtggaccctctcctttt
gaaggtccagggagaaatgggatgggtgcacctccaattattttaccgccttcttttcgg
caggatcctagacgtctgcgaagctaccaagatttggatgcaccagaagatgaagtcact
gtaatagactaccggagtttgtga
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