KEGG   Spinacia oleracea (spinach): 110798912
Entry
110798912         CDS       T05137                                 
Name
(RefSeq) DNA-directed RNA polymerase V subunit 5C-like
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
soe  Spinacia oleracea (spinach)
Pathway
soe03020  RNA polymerase
soe03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:soe00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    110798912
  09124 Replication and repair
   03420 Nucleotide excision repair
    110798912
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:soe03021]
    110798912
   03400 DNA repair and recombination proteins [BR:soe03400]
    110798912
Transcription machinery [BR:soe03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     110798912
  RNA polymerase III system
   RNA polymerase III
     110798912
  RNA polymerase I system
   RNA polymerase I
     110798912
DNA repair and recombination proteins [BR:soe03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      110798912
SSDB
Motif
Pfam: RNA_pol_Rpb5_C RNA_pol_Rpb5_N Mrr_cat_2
Other DBs
NCBI-GeneID: 110798912
NCBI-ProteinID: XP_021859801
UniProt: A0A9R0J2J1
LinkDB
Position
1:complement(66190843..66196287)
AA seq 219 aa
MGNNGEIGNCLTQFIDTGSVESHRYFLARKTLFELLNDRGYTVPSSELNRSLPEFRAEFG
EKPDPLSLRICAPLRANPSTKILVIFGGTEEIKKGNILTIFSQIINKDSLHRIILVLQNK
MNHHARKVVDDYPVKTEIFQITDLMINITKHVLAPKHVKLSVQEKEHLLEKYKLEDYQMP
RMQGNDAIARYYGYEKGEVLKVSYTGGLPNSMVNYRCIL
NT seq 660 nt   +upstreamnt  +downstreamnt
atgggtaacaatggcgaaatcggcaactgcttaacccagtttattgacacgggaagcgtc
gagagtcataggtatttcttggcacgtaaaaccctctttgaacttctcaacgacaggggt
tacactgttccttcctccgagttaaatcgctctctccccgagttccgcgctgagtttggg
gagaaacctgacccgctttcgctccgcatttgcgctcctctccgagctaacccgtctact
aagattttggtcatctttggtggaactgaggaaataaaaaaaggcaacatccttactatc
ttcagtcaaatcattaacaaagatagcttgcaccggattattttagtcctgcaaaacaaa
atgaatcaccatgctcggaaagttgttgatgactacccagtcaaaacagagatttttcag
atcactgacttgatgatcaacatcacaaagcacgtcctggcaccaaaacatgtaaagctg
agtgttcaggagaaggaacatctgctagagaagtacaagttagaggattaccagatgccg
cgcatgcaggggaatgatgctattgcacggtactatgggtatgagaagggtgaagtcctg
aaagtcagctacactggtggactgcccaactccatggttaattatcgctgtattctctga

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