Spinacia oleracea (spinach): 110799010
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Entry
110799010 CDS
T05137
Name
(RefSeq) DNA damage-binding protein 1
KO
K10610
DNA damage-binding protein 1
Organism
soe
Spinacia oleracea (spinach)
Pathway
soe03420
Nucleotide excision repair
soe04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
110799010
09124 Replication and repair
03420 Nucleotide excision repair
110799010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
soe04121
]
110799010
03400 DNA repair and recombination proteins [BR:
soe03400
]
110799010
Ubiquitin system [BR:
soe04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Adoptor protein
110799010
DNA repair and recombination proteins [BR:
soe03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
110799010
TCR (transcription coupled repair) factors
Cul4-CSA complex
110799010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_2nd
Beta-prop_RSE1_1st
CPSF_A
Motif
Other DBs
NCBI-GeneID:
110799010
NCBI-ProteinID:
XP_021859906
UniProt:
A0A9R0J2R5
LinkDB
All DBs
Position
5:51681642..51700590
Genome browser
AA seq
1089 aa
AA seq
DB search
MSIWNYVVTAHKPTNVTHSCVGNFTSPQELNLIVAKCTRIEIHMLTPQGLQPMLDVPIYG
RIATLELFRPHGETQDFLFIATERYKFCVLQWDPETSELVTRAMGDVSDRIGRPTDNGQI
GIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCSRPTIVVL
YQDNKDARHVKTYEVSLKDKDFVEGPWSQNNLDNGADLLIPVPPPFCGVIIVGEETIVYC
SATAFKAIPIRPSITRAYGRVDADGSRYLLGDHAGLLHLLVITHEKEKVTGLKIELLGET
SIASTISYLDNAFVFIGSSYGDSQLIKLNLQPDVKGSYVEVLERYVNLGPIVDFCVVDLE
RQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDVYDTFLVVS
FISETRILAMNLEDELEETEIEGFDSQVQTLFCHDALYNQLVQVTSSSVRLVSSTSRELR
NEWKAPTGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPI
GPNPNFSQLAAVGMWTDISVRIFSLPDLNLIIKENLGGEIIPRSVLLCSFEGISYLLCAL
GDGHLLNFILNMSTGELTDRKKVSLGTQPITLRTFSSKNATHVFAASDRPTVIYSSNKKL
LYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHARRICH
QEQTRTFAICSLKYNQASAEESEMHFVRLLDDQTFEIISTYALDTYECGCSILSCSFSDD
INVYYCVGTAYVLPEENEPTKGRILVFVVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAI
NQKIQLYKWMLRDDGTHELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEG
AIEERARDYNANWMSAVEILDDDVYLGAENNFNLFTVRKNSEGATDEERARLEVVGEYHL
GEFINRFRHGSLVMRLPDSDIGQIPTVIFGTVNGVIGVIASLPNDQYIFLEKLQSNMRKV
IKGVGGLNHEHWRSFHNEKKTADARNFLDGDLIESFLDLSRGRMEEISKTMGTSIEELSK
RVEELTRLH
NT seq
3270 nt
NT seq
+upstream
nt +downstream
nt
atgagcatatggaactacgtcgtcacggctcacaagcctacgaatgtcacacattcctgt
gtcggcaatttcaccagtcctcaagagctcaatcttattgtcgctaaatgcacaagaatt
gagattcacatgttaactcctcaaggtcttcagcccatgctggacgttccaatatatgga
agaattgcaacacttgaactttttcgaccgcatggtgaaacacaagatttcttattcatt
gcaacagaaagatacaaattttgtgttctccaatgggatcctgagacatccgagctcgtg
accagagcaatgggagatgtttcggatcgcatcggtcgtccaactgacaatggtcagatt
ggcatcattgatcctgactgcagattaattgggctccatttatacgatgggttattcaag
gttatcccatttgataacaaaggacagctgaaagaagcttttaatatcaggcttgaggag
cttcaagtgcttgacataaagtttctatatggctgttctagacctacaattgtagttcta
taccaggataataaagacgctcgtcatgtaaaaacatacgaggtttcattgaaggacaaa
gattttgtcgaggggccatggtcccagaacaatcttgataatggggcggatttgcttatt
ccagttccaccaccattttgtggggttatcattgtgggggaggagacaattgtatactgc
agtgccacagcatttaaagcaatccccatcagaccttccattacaagagcctatggaagg
gtggatgctgatggttcccggtatttgctcggtgatcatgcaggacttttgcatctgctt
gttatcactcatgagaaagagaaagttactggcctgaaaatagagcttttgggggagaca
tctattgcatcaacaatatcgtacctggataatgcatttgtttttattggctcaagctat
ggagattcacagctcataaaactaaatttacaaccagatgttaaaggatcgtatgtagaa
gtcttggaaagatatgtcaatttgggtccaattgtagacttctgtgtggttgaccttgag
aggcaagggcaaggccaggttgtaacttgttctggagcatacaaggatggttctcttcgt
attgttcgtaatgggattgggataaatgaacaggcatcagtggagctgcaaggcatcaag
ggaatgtggtccttgaggtcatcgacggatgatgtatatgatactttcttggtcgttagt
ttcatcagcgagaccagaattctagctatgaatcttgaggatgaattggaagaaactgaa
attgaagggtttgactcacaagtgcagactttattttgccatgatgctttgtacaaccaa
ctcgtgcaagtcacctcaagctcagtcagactggtcagttcgacatcaagagaacttcga
aatgagtggaaagccccaacaggatattctgtaaatgttgctactgctaatgcatcccag
gttcttcttgccactggtggtgggcatcttgtttatttggaaattggtgatggaattttg
acggaagtgaaacatgcacagttggagtatgagatatcatgtcttgacataaatcccatt
ggtccaaatccaaattttagtcagctagctgctgttggaatgtggacagatataagcgtt
aggatattttcgcttccagatcttaatctaatcatcaaagagaatctcgggggagaaata
attcctcgctctgttcttctatgctcttttgaaggaatatcgtatttattgtgcgctctt
ggagatggccatctcttgaactttatattgaacatgagtactggtgaactgactgaccgg
aagaaggtgtctctgggtacacaacctattacactcaggacattctcatctaagaatgct
actcatgtatttgccgcctctgatcggccaactgttatatacagcagcaacaaaaagttg
ctttacagtaatgtaaatctcaaggaagttagtcatatgtgccctttcaattcagcagct
tttcctgacagccttgcgatcgcaaaagaaggtgaactcacaataggcaccattgatgat
attcagaagcttcatattcgatctattcctctgggagaacatgctcggcgtatctgccac
caggaacaaactcgcacttttgccatttgtagtttgaagtacaaccaagctagtgcggag
gaatctgaaatgcattttgtacgcttgttggatgaccaaacctttgagatcatatctact
tatgcacttgatacctatgaatgtggttgctccatactgagttgctcattctcagatgac
atcaatgtttactactgtgttggaacagcatatgttttacctgaggaaaatgagccaacc
aagggaagaattctggtttttgttgttgaagacggaaagctgcaactcattgctgagaag
gaaactaaaggtgcagtgtactcacttaatgccttcaacggcaagctgcttgctgccatc
aatcagaaaattcagctttataagtggatgcttcgggatgatggaactcacgagttacag
tctgaatgtggacaccatgggcacattcttgccttgtatgtccagactcgtggtgatttc
attgttgttggggatctgatgaaatcaatttctttactaatatacaagcatgaagaaggt
gctattgaagagcgtgcacgggactacaatgctaattggatgtcagctgtagagattctt
gatgatgatgtgtatcttggtgcagaaaataatttcaatctatttactgtgaggaaaaat
agtgaaggtgcgacggatgaggagcgtgcacggcttgaagttgttggggaataccacctt
ggagaattcatcaaccgttttcgtcatggttctctggttatgaggttgccagattcagac
attggtcaaataccaactgtgatatttggaactgttaatggtgtaataggggtaattgcc
tcccttccgaatgaccagtacatcttccttgagaagctgcagtcaaacatgaggaaggtt
ataaagggtgtaggaggactgaatcatgagcattggcggtcctttcacaatgagaagaag
acagcagatgcgagaaacttccttgatggagatcttattgaatctttccttgatctcagt
cgcggtcgtatggaagagatttctaaaacaatgggtacttcaatagaggaacttagcaag
agagttgaggagttgaccagattgcactaa
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