Spinacia oleracea (spinach): 110799115
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Entry
110799115 CDS
T05137
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 2
KO
K11844
ubiquitin carboxyl-terminal hydrolase 16/45 [EC:
3.4.19.12
]
Organism
soe
Spinacia oleracea (spinach)
Pathway
soe03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
110799115
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
soe01002
]
110799115
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
soe04121
]
110799115
Enzymes [BR:
soe01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
110799115
Peptidases and inhibitors [BR:
soe01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
110799115
Ubiquitin system [BR:
soe04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
110799115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
SR-25
Atrophin-1
Motif
Other DBs
NCBI-GeneID:
110799115
NCBI-ProteinID:
XP_021860006
UniProt:
A0A9R0J275
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All DBs
Position
1:1959155..1969453
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AA seq
1058 aa
AA seq
DB search
MGKKVKKKAARTAHKEKEKEREREKEKEKEKRVSTSSPNAVSLEDNQSSVTADDGPVLQK
ERDACVHLEKGIDLEKFSLKIESAESTGCEDCRDGVNDRKACKGKGKHGKKKGASDSRAN
KATWICLQCGHFSCGAVGLPTSPLSHALRHSRQNRHPLVIQLENPLLRWCFSCNTLLPVD
KLVDIGEHKDVFLDIVKLLKKQSSKVRSVDVEDVWFGSGSVVSEVKEESKAINLVNGKDF
YSVRGLVNLGNTCFFNSVMQNLLAMDVLRECLLNLEGSVGPLTSALKKFFVESSPESGLR
NVINPKSLFGCVCAKASQFRGYQQQDSHELLRCLLDGLSSEDLYAKKSAGSNGKSKPVSS
TFVDAIFGGQTSSSVCCVECGHSSVVYEPFLDLSLSVPTKNPLFKKARPVHRAKKTKLPP
KRGGRIRPKLNKNEDMGPAPSNCTSSTSIESSSGLKGGLKGDMGTAYSGCNTSTSCESSS
SLFAEAPSCAPSADFIGPINLVSRNAMMTQDNNSVEPDDASTEMLQSDAQDADGMSWLTY
VEPISQSDGSQGADCNSWMDYLGPISLSDDPNSAGKVGFSVTQDFGSQDGNHDIISIDGT
SKPIVEANLSQDSTMEGDNLGDVTVPDTSKSGGEVSEQPQYVNLKAESTADDWGEERAVQ
VQENEILLLTYKENGPVDGEEMKVDAEISSSAIVDGEDSLGFDGLGDLFNEPEAAEAGMN
NTPVSDGLGTGFLAGNSTESDPDEVDDTNSPVSVESCLAHFIKPELLSGEHAWHCENCSK
LVKEGRKRMRKNQQKTALIQRNKSSNVCSTSEILHMSHSFPDSLAGLGNGSSDTDENLKK
HDTRRTNELCQDLPQEEEIRCVPEAAHLSASGPAVYSIPSDGKSSDTHDNGPVEKPSGLS
EEHESGEEEEEEVDLKCVKVMRDATKRILISKIPPILTIHLKRFSQDARGRLSKLNGHVG
FKEYIDLGPYMDCRSTERDNCIYHLIGVVEHSGSMRGGHYVAYVRGGDRRKGRSEEETIR
GRSVWYHTSDAYVRETTLEEVLGCEAYILFYEKAKLKL
NT seq
3177 nt
NT seq
+upstream
nt +downstream
nt
atgggaaagaaggttaaaaagaaggcggctcgtactgcccataaggagaaggagaaggag
agggagagggagaaggagaaggagaaggaaaagagggtttctacctcttccccaaacgct
gtttctttggaagataatcagagttccgtgactgctgatgatggacctgtgctgcagaag
gagagggacgcctgtgtccatcttgagaagggtattgatctggagaaattttctttaaaa
attgagtctgcagagtccactggctgcgaagattgcagggacggtgtgaatgaccgaaag
gcctgtaaagggaagggaaaacacggtaagaagaagggtgcttctgattctagagctaat
aaagccacttggatttgcttacaatgcgggcacttttcctgtggagctgttggcttacca
actagcccactaagtcacgcgcttagacattcgagacaaaatcggcatcccttggtgatc
caattggagaatccacttttaaggtggtgtttctcttgcaacacacttctccctgttgat
aaactggtagatattggtgaacataaagatgttttcttagatattgtcaagctattgaaa
aaacagtcttcaaaagtacgttcagtggatgtagaggatgtttggtttggaagtggtagt
gttgtcagtgaagttaaagaagaaagcaaagcaatcaatttagtcaatggaaaagacttc
tattcagtaagagggttggttaaccttggcaatacttgttttttcaattctgtcatgcag
aatctgctagcaatggatgtgctgcgggagtgcttgctgaatttggaagggtctgtgggt
ccattaacgagtgctttgaagaaattttttgttgaatctagccctgagtcaggtctgaga
aatgtaataaaccccaagtcactttttggatgtgtttgtgcaaaagcttctcagtttagg
ggatatcagcagcaggacagtcatgaattgctgcgttgtttgctggatgggctgtcttct
gaagacttgtatgcaaaaaaatcagcaggttctaatgggaaatctaaacctgtgagttca
acatttgttgatgccatatttggcggacaaacatcaagcagtgtatgttgtgttgaatgt
gggcactcttctgttgtgtatgagcctttcctggacctatcactttctgtgccgacgaag
aaccctctctttaagaaggctcgaccagttcatcgagcaaagaagacaaagctgcctcct
aaaagaggtgggaggattcgccctaaactgaataaaaatgaagatatggggcctgctccc
agtaattgtacgagttcaacaagcatcgagtcttcttctggtttgaagggtggtttgaag
ggtgatatggggactgcttatagcggttgtaacacttcaactagttgtgagtcctcttct
agcttgtttgctgaggctcccagctgtgctccatctgctgactttattggacccattaac
ttggttagtagaaatgctatgatgactcaagataataactccgtcgagccagacgatgct
agcactgaaatgctgcaaagtgatgctcaggatgctgatggcatgtcatggttgacttat
gttgaacccatttcccaaagtgatggttcccaaggagctgattgcaatagttggatggat
tatctcgggccaatatcattgtcagatgacccaaattctgctgggaaggtgggtttttct
gtcactcaagattttggaagtcaagatgggaaccacgacattatttctattgacggtaca
tccaagccaattgttgaagctaatttatctcaagattctacaatggagggggacaatctt
ggtgatgtgactgtgccagatacatcaaaatcaggtggtgaagtaagtgagcaacctcag
tatgtgaatcttaaggcggagtccacagctgatgattggggtgaagagcgtgcggtgcag
gtacaggaaaatgaaatattgttgttgacctacaaggaaaatggtcccgtggatggggaa
gagatgaaggtagatgctgaaatctcttcatcagctatagttgatggagaagatagtctg
ggttttgatggcctaggtgatttgttcaatgaacccgaggctgccgaggcaggtatgaat
aataccccggttagtgatggtttgggcactgggtttctagcagggaacagcactgagtct
gatccagatgaagttgatgatacgaattcaccagtatctgtagagagttgtttggcgcat
ttcataaagcctgagcttttgtctggtgagcatgcttggcattgtgagaactgttcaaaa
ctagtaaaagaaggacgaaaaagaatgaggaaaaatcagcagaaaacggcattgatccag
agaaacaagtccagtaatgtatgttcgacttctgaaattttgcatatgagtcattctttt
ccagactccttggctggtcttggcaatggaagcagtgatacagatgagaacttgaagaag
catgacaccagaagaaccaatgagctttgccaagatttaccacaagaggaagaaattaga
tgtgtaccagaagctgcacatcttagtgcctctggtccggctgtttattctataccttct
gatggtaaatctagtgatacccatgataatggtcctgtagagaagccgtctggactaagt
gaggagcatgaatcaggagaagaggaagaggaggaagttgatttgaagtgtgttaaggtg
atgagagacgcaactaaacggatacttatcagcaagatccctccgattttgactatccac
ctaaaaagattttcgcaagatgctcgtggccgtcttagtaaattgaacggccatgttggc
tttaaggaatacattgaccttggaccttacatggattgcaggtccacagaaagagacaat
tgcatataccacttgattggagtggtggagcattctggatcaatgagaggcgggcattat
gtggcatatgttagaggaggtgacaggcgaaaaggaagatcagaagaagaaactatacgg
ggacgttctgtatggtatcatactagtgacgcgtatgttcgtgaaacaacattggaggag
gtcctcggctgtgaggcttacattctgttttatgagaaagctaagcttaagctttga
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integrated database retrieval system
