Spinacia oleracea (spinach): 110799416
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Entry
110799416 CDS
T05137
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 38
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
soe
Spinacia oleracea (spinach)
Pathway
soe03013
Nucleocytoplasmic transport
soe03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110799416
03015 mRNA surveillance pathway
110799416
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
soe03019
]
110799416
Enzymes [BR:
soe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110799416
Messenger RNA biogenesis [BR:
soe03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
110799416
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CFAP143
Motif
Other DBs
NCBI-GeneID:
110799416
NCBI-ProteinID:
XP_021860374
UniProt:
A0A9R0J5M6
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All DBs
Position
5:complement(37986633..37997278)
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AA seq
503 aa
AA seq
DB search
MADSTEATVEAPGSSSTPESSSVPESSAASESCSAPEIKPAEVKRSWGDEVDEEFTIDQL
SIKESKDLDEPEDSNIKAVITGDTPYTSAKKFEDLNLSEELTKGLYVEMRFERPSKVQSV
TLPMILTPPYRNLIAQAHNGSGKTTCFVLGMLSRVDPKQQAPQALCICPTRELAIQNLEV
LKKMGKYTGISAERAVPENLDNPAHTPISKRPPVTSQVIIGTPGTIKKWMSFRKLSMSSM
KILVFDEADHMLAEGGFKDDSLRIMNDIKRSAPSCQVLLFSATFSERVKAFVKSAIQDYN
QLFVKKEELSLQSVKQFKVRCPGELEKVQVVREKILELCQKVGQTIIFVRTRNSASYLHK
ALVDLGYEVTTIQGALTHDDRDKIVKEFKDGLTKVLISTDVLARGFDQSQVNLVVNYDLP
VKHDPNKKYDPNKAEPDCEVYLHRVGRAGRFGRKGAVFNLICDDIDNKVMGKIENHFGCE
VIEVPDYRNDEDFEKALKDAGLL
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atggcggattccaccgaagccaccgtcgaggctcctggaagttcttccacgccggaaagt
tcttccgtgccagaaagttctgctgcgtcggaaagctgctctgcgccggaaatcaaaccg
gcggaggtcaagcgatcttggggcgacgaagttgatgaagaattcaccatcgaccagctt
tctatcaaagaaagcaaggacctagacgagcctgaggattccaacattaaagcggttata
acgggagatacaccatatacatcggccaagaagttcgaggatttgaatttgtctgaggaa
ttaaccaagggtttgtatgtcgagatgcggtttgaaaggccgagtaaggttcaatccgtt
actttgcctatgattttgacaccgccgtatcgaaatttgatcgctcaagctcataatgga
tctgggaaaaccacctgctttgttttggggatgttgagtcgtgttgatcccaaacaacaa
gctcctcaagctctatgcatttgccccaccagagaactggctattcagaacttggaggtg
ctgaagaagatggggaaatataccggaattagtgcagaaagagcagtcccagaaaatttg
gacaatccagctcatactccaataagtaagcgtcctccggttacatcccaagtgattatt
gggacgcctggtactattaaaaagtggatgtcatttaggaaattgtctatgtcatctatg
aagatcctggtatttgatgaagcagatcatatgttagctgagggtgggttcaaggatgat
tcccttagaattatgaacgatatcaagagaagtgctcctagttgccaggtgttgctattt
tctgccacctttagtgaaagggtgaaggcttttgttaagtctgcaattcaagattacaat
cagctttttgtcaagaaggaagaattgtctctgcagtcagtgaagcagtttaaggttcgc
tgccctggtgagctggaaaaagttcaagttgtccgagagaaaatattagagttgtgtcaa
aaggttggccagaccattatatttgtacgcacaagaaacagcgcaagttatcttcataag
gcgcttgtggatttaggttatgaagtaactaccattcaaggtgctcttacccatgatgac
agagataaaattgtgaaagagttcaaagatgggttgactaaagtacttatatcaactgat
gttcttgctagaggctttgaccaatcccaggtcaacttggtggttaactatgatcttcca
gtgaaacatgatcctaataagaaatatgatcctaataaggcagagcctgactgtgaggta
tatttgcacagagtcggacgagcaggacgttttgggcgtaaaggcgctgtgtttaatttg
atttgtgatgatatagacaataaggtcatggggaagattgagaatcattttggatgtgaa
gtaattgaggtgcctgactacaggaacgatgaagactttgaaaaagcactgaaggatgct
ggtttactttga
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