Spinacia oleracea (spinach): 110799456
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Entry
110799456 CDS
T05137
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1-like
KO
K14485
transport inhibitor response 1
Organism
soe
Spinacia oleracea (spinach)
Pathway
soe04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
110799456
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
soe04121
]
110799456
Ubiquitin system [BR:
soe04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
110799456
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
F-box-like
F-box
LRR_NXF1-5
LRR_At1g61320_AtMIF1
LRR_8
Motif
Other DBs
NCBI-GeneID:
110799456
NCBI-ProteinID:
XP_021860415
UniProt:
A0A9R0K7M5
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Position
4:30744293..30749057
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AA seq
610 aa
AA seq
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MEQESPAKTHLRTTAKTTPFAALCSAAASAFPEEVLEHVLSFIESHSDLNSVSLVCKAWY
EIERWCRRRIFIGNCYAVSPSIVIRRFRDIRSVTIKGKPHFADFNLVPDGWGGHALPWIV
AFSDAFPALEELRMKRMVVTDEALELIGKKWRNFKVLVLCSCEGFSTDGLASIAANCRNL
KTLDLCESEVDDLSGNWISHFPDTYTSLESLNVACLVSELRFSSLERLVSRCQNLKSLRL
NRAVPLEKLSILLEKAPQMVDFGSGSFLTELNTEAHDKLTRSFAGCKGMKGLSGLYDVVP
AYLPALYPVCSGLTSLNLSYATIHSPDLIKLLTHCHSLQRLWVLDYIEDSGLEVLAESCK
DLRELRVFPSEPYVQEPNVCLTEQGLVSVAMGCPQLQSVLYFCRQMSNEALFTIAKNRPN
LTRFRLCIIEPQCPDYLTNEPLDEGFGAIVEHCKDLRRLSLSGLLTDRVFELMGTHAKKL
EMLSLAFAGESDVGLHCLLSGCKNLRKLEIRDCPFGGRALVVNAAKLETMRSLWMSSCQV
SYGECKLLGQKMQRLNVEVMDERGHPDSRPDECPVEKLYIYRTVVGPRLDTPEFVWTTGQ
EEDSASLVVV
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atggagcaagaatctccggcaaagacccacctcagaaccaccgctaaaactaccccattc
gccgcgctttgctctgctgccgcctccgccttcccggaagaagtccttgagcatgttcta
tccttcattgagtcacactcggacctcaactcggtctcgctagtttgcaaagcttggtat
gagatcgaacggtggtgccgacgccggatcttcatcggaaattgctacgcggtcagccct
tcgattgtcatcaggcggtttagggatatccgatctgttactataaagggaaagcctcat
tttgctgattttaatcttgttcctgatggttggggtggccacgctttgccgtggatcgtt
gccttttctgacgctttcccggcgttagaggagctcaggatgaagcggatggttgtcact
gatgaagctcttgaattaattggtaaaaaatggcggaattttaaggttctggttttgtgt
tcttgtgaagggttttctactgatggtttggcttcgattgctgctaattgcaggaacttg
aaaaccctcgacttatgcgaaagtgaagttgatgacctgagtgggaattggataagccat
tttccggatacttacacctctctagaatcacttaatgttgcctgcctcgtatcagagctg
cgattctcttctcttgagcggttggtgagcagatgccagaatctgaaatcgctgaggctg
aaccgtgcagtgccattggagaagctctcaattcttttggaaaaggctcctcagatggtt
gactttgggtctggctcatttttgaccgagctcaacactgaagcccatgataagcttacc
aggtcatttgcaggatgtaaagggatgaaggggctttctggtctttatgatgttgtcccc
gcgtatcttccagctctatatcctgtctgttcggggctcacttctttgaatttgagttat
gccaccattcactcccctgatctcatcaaacttcttactcactgccacagtcttcagcgt
ctttgggttcttgattatattgaagacagtgggcttgaagtgcttgcagaatcatgcaag
gatctgcgggagctacgtgtgtttccctcagagccttatgttcaagaaccaaatgtttgc
ttaaccgagcagggtctggtatctgtggctatgggttgtcctcaactgcaatcagttctt
tatttttgccggcaaatgtctaacgaagcattattcaccattgcgaaaaatcggcccaac
ctaacacggttccgtctatgcatcatagagccacaatgcccagactacttaacgaatgaa
ccactagacgagggtttcggggccattgtggagcattgcaaagacctccgtcggctttcg
ttgtcgggtctccttacggaccgtgtttttgagctgatggggacccacgcgaagaaactg
gaaatgctttcgctggcatttgctggagagagtgatgtgggtttgcattgtctattatca
gggtgcaaaaacctaaggaaactggagataagggattgcccatttggtgggagggcgtta
gtggtaaatgcagcaaagttggagacaatgcgatccctttggatgtcttcgtgccaagtg
agctacggggagtgtaaactgcttggacagaagatgcagaggttgaatgtggaggttatg
gatgaaagaggccaccctgattctagacctgatgaatgccccgttgagaagctttacatc
taccggaccgttgttggacccaggttagacactcccgagtttgtttggacaaccggccaa
gaagaagactcagcgtcactggttgttgtttaa
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