Spinacia oleracea (spinach): 110799553
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Entry
110799553 CDS
T05137
Name
(RefSeq) protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 isoform X1
KO
K11661
helicase SRCAP/SWR1 [EC:5.6.2.-]
Organism
soe
Spinacia oleracea (spinach)
Pathway
soe03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
110799553
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
soe03036
]
110799553
Chromosome and associated proteins [BR:
soe03036
]
Eukaryotic type
Chromatin remodeling factors
SRCAP complex
110799553
SWR1 complex
110799553
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HSA
ResIII
DEAD
Myb_DNA-bind_6
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
110799553
NCBI-ProteinID:
XP_056690995
LinkDB
All DBs
Position
1:10583738..10603265
Genome browser
AA seq
2077 aa
AA seq
DB search
MASKGPRSKLDHDSRARRQKALEAPREPRRPKTHWDHVLEEMIWLSKDFEAERKWKLAQA
KKVALRASRGMLDPVTRGEKRMKEEEQRMRKVALNISKDVKKFWTKIEKLVHYKHQLELD
CKKKAALDKQLEYLLDQTERYSTMLAENLMGPSTSCPSGQPSIQENTCYSKQTGEKTVDG
GSMELLAEAKSDTEIKMDEMDADDDFDLSSEDEAEDDEQTIEEDEALITEEERQEELAAL
QNEVELPLEELLKRYSMIEVTEESNAEAVRESCVEVGLAQVNGERFPEKLRASVESPDDV
GADGETNFLAVAKVDADCSSDFASRRCRKRNGPMTSNNVSEVEARFSKKSSEGMSHSDLV
DVDYDFDDELADDEFVIATGEEKDDETTLAEEEELAIAESKRPEDEIALLQQESEIPLEE
LLAKYKMEISEVGSADDDSDSCSAHSDIESYPVEQVFDKEDRCNSTVEDDVSEEIKKNSP
APGEEADASHVLDSEEDSQRDARIADAAAAARSAQPTGNTFSTTNVRTNFPFLIKHPLRE
YQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIALLAHLACEKGIWGPHLIVVPTSVML
NWETEFMKWCPAFKILTYFGSAKERKNKRQGWMKPNSFHVCITTYRLVIQDSKIFKRKKW
KYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFLMPHIFQSH
QEFKDWFCNPIAGMVEGQEKVNKEVIDRLHNVLRPFILRRLKRDVEKQLPMKHEHVIYCR
LSKRQRNLYEDFIASSETQTTLASANFIGMLNVIMQLRKVCNHPDLFEGRSIISSFDMEG
IEMQLSSSVCSILSPGLFSSTNLSGLGLLFTYLDFRMTSWEFDVVQSIATPSRLIEHRVS
HNNLEVVKPGFKYGKKGYGTNIFEEIRKAIFEERLKEAKQRATAIAWWNSLRCQKKPVYS
TTLRELLTVKHPVYDIQYCKKNPVSYNYSSKLADIVLSPVERFQKMIDQVESFMFVIPAA
RAPPPACWCNKSGTSVFIDAAYREECSQNLLPLLTPIRPALVRRQLYFPDRRLIQFDCGK
LQQLASLLRRLKSGGHRALIFTQMTKMLDILEAFISLYGYTYMRLDGSTQPEQRQTLMQR
FNTNPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREVHIY
RLISESTIEENILKKANQKRALDNLVIQSGGYNTEFFKKLDPMELFSGHRLAPLKETGKE
NNSDKEAEVLVSNADIEAALKNAEDEADYMALKKVEEEEAVDNQEFTEEATGKLEDEDLG
NEDIIKADESADHNALVTASNIEAMVVADGNDLGGEKALTLACDEDDVDMIADVKQMAAA
AAAAGQEVLSFENQLRPIDRYAMHFLEVWDPIINKEAINYQVQFEEREWELERIEKLKED
MEAELDDDDEPLVYEKWDAEFATQAYHQQVEALAQHQLMEELESKAKEKEIGEDVNDDFI
KNEASGAGKLKAKKKKPKKTKFKSLKKHSLSSASKAVKEDYVVEHMSSDEDPSHEEAACV
DVSPPCILLKKKRKKNQTDIAEEEMSLKIKLKKGKKTALVTTLPSRESNVLSLLHEDTKD
SKSCEDGTLDLELKPTSRGKTGGRISITTMPMKRIYTIRPEKLKKKGNMWSSDCFPSPDS
WMPQEDAVLCALVQEYGPNWSLVSDSLYGMSAGGLYRGRFRHPTLCCERYRELFQKYVHA
VADTPNNEKTSTTGPAKGLLKVTEDNCRVLLDAVTEQPDDELLLQRHFTALLISVWRMTS
SLDQQRSRSNHHNNLYPSIRLFGTSVNPNAQNSTTGLSQKKFDLGQSGKLITKALRDVES
VVWNNKTSLSNQMEEDVPAIEKLDITLEFERERAETVGFPSMVSLSIPGLDPIPPVIPPK
ENQLKSTQQVAESRFRASSSACVDGSFGWASSAFPIIESRNRLSLKSPLSGKHKLGPGET
SRPSKSKVRKVAEATHHNPFAEALLPTTVPDTPSTTSGSGIPDSSFEDHIIDPDPLYGAE
DDSSCSKNNELFPHCYSPSFISGLDVCSLDEYTDDIG
NT seq
6234 nt
NT seq
+upstream
nt +downstream
nt
atggcttctaaaggtcccaggtctaaacttgatcatgattcgagagctcgacgtcaaaag
gcgcttgaagctcctagagaacctcgccgccctaaaacacattgggatcatgttttagag
gagatgatttggttatcaaaggactttgaggctgagaggaaatggaagttagcgcaggca
aagaaagtagccttacgagcaagtaggggcatgttagatccagttacgaggggggaaaaa
agaatgaaggaagaagagcagagaatgagaaaagttgcacttaatatttcaaaggatgtc
aaaaaattctggactaaaatcgagaagctggtgcattacaagcatcagttagagcttgat
tgtaaaaagaaggcggcacttgacaagcagttagagtatctcctggatcaaactgaaagg
tattcgactatgctggcagaaaatctcatgggcccgtcaacctcctgtccttctggacag
ccatctattcaggagaatacttgttactctaagcagactggtgaaaagacagtggatgga
ggatctatggaattgcttgctgaggcaaaatcggatacagagattaaaatggacgaaatg
gatgctgatgatgattttgatctgtcctctgaggatgaagcagaagatgacgagcagact
attgaggaagatgaagctctaataacagaggaagaaagacaagaagaattggctgctctg
caaaatgaagtagagttgcctctcgaagaactactcaagcgctattcaatgattgaagtt
actgaagaaagtaatgctgaggctgtaagagagtcctgtgttgaggttggcctagctcag
gtcaatggcgagcgttttccagaaaaactccgtgcttctgtagaaagccctgatgatgtt
ggtgcagatggtgaaaccaattttcttgctgtagctaaggtagatgctgactgctcatca
gattttgccagtcgtcgttgtcgaaaacgcaatggtccaatgacatcgaacaacgtatct
gaagttgaggcccgtttctccaaaaaatcatctgagggcatgtcccattctgacctcgta
gacgtggattatgatttcgacgatgaactggcagatgatgagtttgtcattgccactgga
gaagagaaggatgatgaaacaaccttggctgaggaggaggagttggcaatagcagagtcg
aagaggcctgaagatgagattgcattattgcagcaagaaagtgagattcccttggaagaa
ttgcttgcaaaatataaaatggaaatttccgaggtcggctctgctgatgacgactcagat
tcttgttctgctcactctgatatagagagttatccagttgagcaagtgtttgacaaagaa
gaccggtgtaattctacagttgaagatgatgtatctgaggagattaaaaaaaattcacct
gctcctggagaagaagctgatgctagtcatgtgctggattccgaagaggatagtcaaaga
gatgctagaattgctgatgcagcagctgctgccaggtctgcacaaccgacagggaatact
ttctccacgactaatgtacgaacaaatttcccctttcttattaaacaccctcttcgtgag
tatcagcacattgggcttgactggctggttacaatgtatgagaaaagacttaatgggatt
cttgctgatgagatgggtctaggaaagacaattatgacgattgcattactcgctcacttg
gcttgtgagaagggaatatgggggcctcatctcattgtggtgccaactagtgtcatgctt
aactgggaaactgagtttatgaagtggtgccctgcatttaagatcttaacttactttggg
agtgcaaaggagcgcaaaaataagaggcaaggttggatgaaacccaactctttccatgtt
tgcatcactacttacagacttgttattcaagattcaaaaatttttaaacgcaagaagtgg
aagtatttgattttagacgaggctcatttgataaagaactggaaatctcagcggtggcaa
actcttttgaacttcaattcaaagcggcgtatcttgttgacgggtacaccattgcagaat
gatctaatggagttgtggtctttaatgcattttttgatgccccatatctttcagtctcac
caagaatttaaggactggttttgcaatccaatagcaggcatggtggaaggacaagaaaag
gtgaacaaagaagtgattgatcgcctgcataatgttttgcggccgtttattctgcgccgt
ctaaaaagggatgttgaaaaacagctccctatgaaacatgagcatgtcatatactgcaga
ctctccaagaggcaaaggaatttgtatgaagatttcattgctagttcagaaacccaaacc
actctggctagtgccaatttcatcggtatgttaaatgttataatgcagctacgtaaagtt
tgtaatcatcctgacttatttgagggacgttctatcataagttcttttgatatggagggg
attgagatgcaattgagctcttcagtgtgctcaattctttcgcctggtctattttcttcc
acaaatctttctggtttggggctcttatttacatatctagattttagaatgacatcttgg
gagtttgatgtagttcaatctattgccactccttctagattaattgagcatcgtgttagt
cataataatctggaagttgttaagcctggatttaaatacggaaagaaaggttatggaaca
aacatttttgaagagattcggaaggcaattttcgaggagagattaaaagaagctaaacag
cgggcaactgcaattgcatggtggaattcattaaggtgtcagaagaagccagtatattca
acaactctacgcgaacttctgacggtaaagcatccagtttacgacatacagtactgtaag
aaaaatcctgtgtcttacaactattcctcaaagcttgcggacattgttttgtcacctgtg
gaaagattccagaagatgatagatcaggttgaatctttcatgtttgttattccagctgca
cgagctcctccacctgcttgttggtgcaataaatctgggacttccgtttttattgatgca
gcctacagggaagaatgctcccaaaatttgctgcctctcttgactcctatacgtcctgcc
cttgttcgaaggcagctgtatttccctgacagacgtttgatacaatttgattgtggaaag
ctccagcaacttgctagtttgttgcgaagattgaaaagtgggggtcatagagcattaatc
ttcactcaaatgacaaaaatgcttgatattttggaagcttttataagtttgtatggttat
acttacatgcgtttggacggatcaacccaaccggagcagagacaaactttgatgcagaga
tttaacacaaatcccaagatatttttgtttattctgtctacacgtagtggaggtgtagga
ataaatcttgttggagcagatacagtgatattttatgacagtgactggaaccctgccatg
gatcaacaagctcaagatcgttgtcatcgcattggacaaacccgtgaagtccatatctac
cgcttaataagcgagagtaccattgaagagaatatcttaaagaaagcaaaccagaaacga
gctcttgataacctagtaatacaaagtggtggctacaatactgagtttttcaagaagctt
gacccaatggagttgttttcaggtcatagattagctcccttaaaagagacaggcaaagag
aacaactcagataaggaggctgaggttcttgtttctaatgctgatatagaggctgctttg
aaaaatgctgaagatgaggcagattatatggcgctgaagaaggttgaagaggaagaggct
gtagataaccaggaatttactgaggaggcgaccgggaagctagaagatgaggacttggga
aatgaggatattattaaagctgatgaatctgcagaccataatgcattggttactgcttca
aatatagaggctatggttgttgcagatgggaatgatctgggtggagagaaggctctcact
ttagcatgcgatgaagacgacgttgatatgattgctgatgtcaaacaaatggcagctgca
gctgcagctgctggacaagaagtcttatctttcgaaaatcaattacgtccaatcgatagg
tatgcaatgcatttcttggaggtttgggaccccataataaacaaggaggcaataaattat
caagttcagttcgaggagagagagtgggagttagagcgtatcgagaagttgaaagaggat
atggaggcagagcttgatgatgatgatgagcctcttgtatatgagaaatgggatgcggaa
tttgctacccaagcttatcaccagcaagttgaggctttagctcagcatcagttgatggaa
gaactagaaagcaaggccaaagagaaggaaattggcgaggatgtgaatgatgattttatc
aagaatgaagcatctggtgctggtaaattgaaggcaaagaaaaagaaaccaaagaaaaca
aaattcaaatctctaaagaagcactctttgtcctctgcatcgaaagctgtgaaagaggac
tacgtggtagaacatatgtcgtcggacgaagatccatctcatgaagaggctgcttgtgta
gatgtaagcccaccttgtatcctgttaaaaaagaaacggaagaagaaccaaactgatatt
gctgaagaagagatgtccttaaagatcaagctaaaaaagggcaagaagactgctcttgta
acgacattgccatctagggaatcaaacgtattaagcttgttacatgaagatacaaaagat
tcaaagtcatgtgaggatggcacacttgatttagagctaaagcctactagtaggggtaag
acgggagggagaatttcaatcacgactatgccaatgaagaggatttatactataaggcct
gaaaaattgaagaaaaaagggaacatgtggtcaagtgactgtttcccttcgcctgattcc
tggatgccacaagaggatgcagttttgtgtgctcttgtacaagagtatggtccaaattgg
agcttggttagtgattctctttatgggatgtctgctggtggtttgtacaggggaaggttt
cgacaccccactctgtgttgtgaaagatatagggaactcttccaaaaatatgttcacgct
gtcgcagacactcccaataatgaaaaaacaagcacaactggacctgcaaaggggttactg
aaagttactgaggataactgtcgagtactgttggatgctgttacggaacaaccagatgat
gagttacttttgcaacggcatttcactgctcttctcatttcagtttggaggatgacatcc
tctcttgatcagcaaagaagtcgttcaaatcatcataacaatttgtatccaagcataagg
ttgtttggtacatctgtcaatccgaatgctcaaaattcaaccacagggctttcccaaaaa
aagtttgatttgggtcagagtgggaaacttataactaaagcattgcgtgatgtggaaagt
gtggtctggaataacaaaacctctctatccaaccagatggaagaggatgtacctgctata
gagaagttagacatcacattggagtttgaaagagagagagctgaaactgttggttttccg
tccatggtgtcattgtcgatacctggcttggatccaatacctcctgtaatacctcctaaa
gaaaatcaacttaagtccactcaacaagtggctgagagccgtttcagggcatcctcaagt
gcatgtgttgatgggtcttttggttgggcatcctctgcttttcccataattgaatctcgt
aaccggttgtcactaaaatcacctttatcagggaaacacaagctgggtcccggtgaaacg
agcagaccttccaaatcgaaggtcagaaaagttgcagaagctacacatcataacccattt
gcagaagcattactgcccaccaccgtacctgacactccaagtaccacttctggttctgga
atcccagacagctctttcgaggatcatattatcgaccctgaccctctatatggtgcagag
gatgactcttcatgttcaaagaataacgagttgtttcctcattgttatagtcccagcttc
atttcaggacttgatgtctgttcattggatgaatatacagatgatattgggtaa
DBGET
integrated database retrieval system
