Spinacia oleracea (spinach): 110799562
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Entry
110799562 CDS
T05137
Name
(RefSeq) serine/arginine-rich splicing factor RS41-like isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
soe
Spinacia oleracea (spinach)
Pathway
soe03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110799562
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
soe03041
]
110799562
Spliceosome [BR:
soe03041
]
Common components
Common spliceosomal components
SR proteins
110799562
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
RRM_5
DUF2129
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
110799562
NCBI-ProteinID:
XP_021860520
UniProt:
A0A9R0K7Q9
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All DBs
Position
2:102773381..102780221
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AA seq
333 aa
AA seq
DB search
MRAIFCGNLEYDARQSEVERVFKRYGRVERVDMKSGFAFVYMEDEKDADDAIRRLDRSEF
GRKGRRLRVEWTKQERDTRRPGGGARKPAANDKPSKTLFVINFDPIYTKSKDLERHFDAH
GKIANIRIRRNFAFIQYETLEDATRALEATNMSKVMDRVITVEYAIRDDDRSNGHSPERR
GRDLSPERGSYRRRSPSPYRRERGSPDYGHRRDRGSPDYGRGGRSEARGSPDYGRDESPA
NGRYHSRSRPEARGSPEFVKDESPANGRYHSRSRPEGRGTPDYPKDESPANGRYHSRSRP
ETRGTPDYAKDEGPANGGRYHSRSPPPRERSRS
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgagggccatcttctgcgggaacttggaatatgatgcgcggcaatctgaggtcgagcgg
gtttttaaaagatatgggagggtcgaaagggttgatatgaagtctgggttcgcatttgtt
tatatggaagatgagaaagatgccgacgacgccatcagaagacttgaccgatctgaattt
gggagaaaagggcggcgtcttcgtgttgaatggaccaagcaagaacgtgacactcgaagg
cctggtggtggtgcgagaaaacctgcagctaatgacaagccttctaaaacactgtttgtc
atcaactttgacccaatctatactaaatccaaggacttggaaaggcactttgatgcacat
gggaaaatagcaaacataaggattaggagaaatttcgcattcattcagtatgaaactctg
gaggatgctactagggcattggaagctacaaacatgagtaaggttatggacagggttata
actgtggaatatgcgattcgggatgatgatagaagcaatggtcacagtcctgaaagaagg
ggtagggacttgtctcctgagagaggaagttaccgtaggagatctccaagtccttatcgc
agggagaggggtagtccagactatggacaccgcagggatagaggtagccctgactatggc
cgtggcggcagatcagaagctagaggcagtcctgattatggcagagatgaaagccctgct
aatggaagataccacagtcgctctagacccgaagctcggggtagtcctgaatttgttaaa
gatgaaagccctgctaatggaagataccacagtcgctctagacctgaaggccgaggaact
cctgattatcctaaagatgaaagccctgctaatggaagataccacagtcgatctagacct
gaaactcggggaactcctgattatgctaaagatgaaggccctgctaatggaggaagatac
cacagtcgatcacctccaccacgagagaggtcgagatcctaa
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