Spinacia oleracea (spinach): 110799797
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Entry
110799797 CDS
T05137
Name
(RefSeq) probable ubiquitin conjugation factor E4
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
soe
Spinacia oleracea (spinach)
Pathway
soe04120
Ubiquitin mediated proteolysis
soe04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
110799797
04120 Ubiquitin mediated proteolysis
110799797
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
soe04121
]
110799797
Enzymes [BR:
soe01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110799797
Ubiquitin system [BR:
soe04121
]
Ubiquitin ligases (E3)
U-box type E3
110799797
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
110799797
NCBI-ProteinID:
XP_021860760
UniProt:
A0A9R0K7Y4
LinkDB
All DBs
Position
2:complement(64005403..64022529)
Genome browser
AA seq
1045 aa
AA seq
DB search
MATKKPQRSPAEVEDIILRKIFLVSLVDSMELDSRVVYLELTAAEVLSEGKELLLCRDLM
ERVLIDRLSNDFPNAESPFTYLVGCYRRAYEEGKKIMSMKDKDLRSEMESVCNQAKKLAV
SYCRIHLGNPDMFPGVDEAPFSDNANPMGKKLSSLLPLIYSDVGGAVIDSFGGSGSNGGI
TSPPGFLDEFFGEGDFDSLDPIFTYLYDNLREKVVRESALGNFQQPMRALLYLVGFPAGA
KSLVIHKWWMPPGSFSNGRAMEVASILGPFFHISALPDIALFKSHPDVGQQCFSESSSRR
QADLLSSFTTIKTVMNNLYDGLHEVLLCLLKKPDTRENILEFLAAVINSNSSRAHLQIDP
LTCASSGMFVNLSAVMLRLCEPFLDANLMKRDKIDPNYVFYSNRLALRGLTALHASSEEV
TAYISELNNGRVERSTESSVTDNRSLTSLEATGSGGPPIENVQSVSRSGDKVKYPFICEC
FFMTARVLNLGLLKAFSDFKHLVQDISRSEDSLATFKAMQEQAPNRQLEMDITRLEKEIE
SYTQEKFCYEAQILRDGGLIQRALSFCRLEVVWLVGLVGGFKLPLPSPCPMEFACMPEHF
VEDTMELLIFASRIPKALDGVILDDFMNFIIMFMASPEYIRNPYLRAKMVEVLNGWMPRR
SGSSATANLFEGHQLSLQYLVKNLLKLYVDIEFTGSHTQFYDKFNIRHNIAELLEYLWQV
PSHRNVWRLIAKEEEKGVYLNFLNFLINDSIYLLDESLNKILELKTLEAEMSNTAEWEQR
PAQERQERTRTFHSQENIIRLDMKLANEDVSLLAFTSEQITAPLLLPEMVERVASMLNYF
LLQLVGPQRKSLSLKDPEKYEFRPKHLLKQIVNIYVHLAKGDVGNVFPAAISRDGRSYNE
QLFGAAADVLIRIGEDGRIIQEFVELGVKAKAAAAEAMDAENALGDIPDEFLDPIQYTLM
KDPVILPSSKVTLDRPVILRHLLSDSTDPFNRSPLSPDMLIPDHELKARIEEFVRSHSTR
NHDDVLLQSTKGTIQTPTTDMHLID
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccaagaagccccaaagatcgccagcagaagtcgaggacataattctgcggaaa
atatttcttgtgtctctcgtagattcaatggaattggattcccgtgtagtttacctggaa
ttaactgctgctgaagttctcagcgagggcaaggaattgctgttatgtagggatttgatg
gaaagggttttgattgaccggctttcaaatgatttcccgaatgccgaatcaccttttact
tatttagttggatgttataggcgtgcttatgaagaagggaagaagattatgagcatgaaa
gataaggatttgaggtctgagatggagtcagtatgtaatcaagccaagaaattggcggta
tcgtattgtaggattcacttaggtaaccctgatatgtttcctggtgtagatgaagctcct
tttagtgacaatgctaatccgatggggaagaaactgtcgtcattgttgcctttgatttat
tcggatgttggtggcgccgttattgatagctttggaggatctggaagtaatggtgggatt
actagcccaccagggtttttggatgaattctttggggagggggattttgatagtttagac
ccgatttttacttatttgtatgataacttgagggaaaaagtggtaagggaatcggctttg
ggaaattttcagcagccgatgagggctttgttatatctggttggtttcccagctggggca
aagtctttagttattcataaatggtggatgccaccagggtcattttcgaacggtcgtgct
atggaggttgctagcattttgggtcctttctttcatatcagtgcactacccgatattgct
ctttttaagagccatcctgatgttggtcagcagtgcttctctgaatcatcatctcgtcgt
caagctgatctactatcgtcattcactaccataaagaccgtgatgaataatttgtatgat
ggtctgcatgaggttcttctttgtcttctgaaaaaaccagatactcgagaaaatatttta
gaatttttagcagcagtaatcaatagcaattcctcgagggcacatttgcagattgatcca
ttgacctgtgctagctctggcatgtttgtcaatctcagtgctgttatgctcaggctttgt
gagccatttttagatgctaatctcatgaaacgggataaaatcgatcctaactatgtattt
tacagcaatcgtttggctttaagaggattaaccgcactgcatgcttcatcagaagaagtt
acggcttatatttctgagcttaataacggaagagtagaacgttctaccgaaagtagtgtt
acagataaccgctcgttgacatctttggaagccactggttctggtggtcctcctattgag
aatgtgcaatcagtgtcaagaagtggtgataaagttaaatatcccttcatatgtgaatgc
ttctttatgacagcaagggttcttaacttggggttattaaaggcattttcagatttcaag
catctagttcaggatatctcaagatcggaagattccctggctacctttaaggccatgcaa
gagcaagctccaaatcgtcagttggagatggatataactcgtcttgaaaaagagattgaa
tcatatacacaagaaaagttttgttatgaggcacaaatacttagggacggggggcttatt
cagcgcgctttatcattttgccggttagaggtggtctggttggttggcctagttggtggt
ttcaaactgcctctgccatctccttgtcctatggaatttgcttgtatgccagaacatttt
gtggaggatacaatggaattgctgatatttgcatctcgaatcccaaaagctttggatggg
gtcattttggatgatttcatgaactttatcatcatgtttatggctagccccgaatatatt
agaaatccttatttaagagcaaaaatggtcgaagtgctgaatggttggatgcctcgtagg
agtggctcttctgcaacagctaatctatttgaaggacatcaattgtctttgcaatatctt
gtcaagaatcttctaaagctgtacgttgacattgaattcacgggatctcatacacagttc
tatgataaatttaatattcgtcacaatattgcagagcttttggaatatctttggcaggtt
cctagtcatcgcaatgtttggagactgattgcaaaggaagaagaaaagggcgtctaccta
aatttcttaaatttcctgattaacgacagcatctacctccttgatgaaagccttaataaa
atccttgaactcaaaacgctagaagctgagatgtccaatactgctgaatgggaacaaaga
cccgctcaagagaggcaggagagaactcggactttccattctcaagagaatataattaga
cttgatatgaaattggcaaatgaagatgttagtctgctggctttcacttcagaacagatt
actgcgcctttgcttcttccggaaatggttgaaagagttgccagcatgcttaattacttt
ttgctacaattagtgggtccacaaaggaaatcgttgagcttgaaggatcctgagaagtac
gagttccgtccaaaacatctgcttaaacagattgtcaacatctatgttcatctggcaaag
ggagatgtgggaaatgttttccctgctgcaatttcaagggatgggcggtcttacaatgaa
cagttgtttggcgctgcagctgacgttcttatacggataggagaagatggaagaattata
caagagtttgtcgaacttggtgtaaaagctaaagctgcggctgctgaagccatggacgca
gagaatgctcttggtgacatacctgatgaattcttggacccaattcagtacacgctgatg
aaggacccggttattttgccttcttcaaaagtcacccttgatcggcctgtcatcttgagg
catctactgagtgacagtactgatcctttcaaccgttccccgctttctccagacatgcta
attcctgatcacgagcttaaggccagaattgaggaatttgtcaggagccattcaactagg
aaccatgatgatgtacttctgcaaagcaccaagggaacaatacaaaccccaacaactgat
atgcacttgattgattaa
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