Spinacia oleracea (spinach): 110799830
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Entry
110799830 CDS
T05137
Name
(RefSeq) uncharacterized protein LOC110799830 isoform X1
KO
K14772
U3 small nucleolar RNA-associated protein 20
Organism
soe
Spinacia oleracea (spinach)
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
soe03009
]
110799830
Ribosome biogenesis [BR:
soe03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
110799830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP20_N
UTP20
UTP20_C
Chordopox_A30L
Motif
Other DBs
NCBI-GeneID:
110799830
NCBI-ProteinID:
XP_056690941
LinkDB
All DBs
Position
1:4657635..4679855
Genome browser
AA seq
2694 aa
AA seq
DB search
MASAKDAQAVKTLNTTPGHRNRRFVYKSVTQRIEEIEIDVFWNLHTLKAEPSSSSYFLDC
LIYWRELNTAEDFISLYEELMPLVQTLPLVLLHKDMIISRLLSTLQMKARLSLEAILRLI
AELSRDILEDFIPFFPKISESYLALLRDGADQEPEIIKQIFTSWSYIMVNLKKYLIQDVV
HVLKVSVKLRYYPKEFVQEFMAQAISYLLRQSSDGQLEKGVKKILFEAAKKPSQAKKSGV
SALLWYTMRGPSSKFHSKACRVLQLLTKHDFLSIGDKFDQGSDTVVEIVITAIERCMELN
LAELNLIWDCLYEAIGNSVSGGYSQHLSRLLSVLISTISFDHGRNISDYDQMLNLVGLLK
GEFILPYISGETEELVSEAADKTFQLMLCVLDGIHSNNNLTAIPEIALQWASVFQLRSSS
LLTFLKVLVLKDYAILAFRSNILSGWLNVLDIAKGEALDLMLAFCERFQVKTGSFHVLEG
ILEEVVLKLSCFFQKTICHWIEVLSSLTQGDMIVDQVDEDNLALLWGTICCIPYLLPVEG
NVHLMGLVDVVDQLLIAEADVVTGVPKRTWQGLIGAALHSYHNTGRPERCELEDISKILR
LGKSYKSSQQILSAVADYLDSSCGSSNHSGVIRPPKLETEEVIDAMNAFSENLYNPNKEL
RVSTLRILCHYELLSHESQQMDTGVSEEKHADTQCYNVFNLLLSIEQTPISVATSRKVTL
LVSRIQASLSAPGTTEVYVLPAFYGIIGLLYNQYSDLSNSAIECLSVMISKYPGILWNRF
ISFFEQCQTSSLKTHGLDISNIESCSETTDLVEHFRSYCGTVSGDSSGSSILSLLLQALE
RIPTVTESHSRQIVPLFFRFLGYGDEIPCLESFNSQACGGKDWKLILTEWLNLLKLMKNS
RSFYRSQLLKEVLVNRLLDNNDVEIQTRVLDCLLNWKDSFLLPYEKQLNNLVNSKCLREE
LATWSLSVESNLVEEEHRAELVPLVIRLLMPKVRSLRTLASRKHASVNNRKAVLGFIAQL
GVSELVLFFQLLMKSLQITDLGNDGVGSYAWVSGKSNLDELDLSSWSNLFTMERILAIPL
KKRYGFLHVVEEIFRIFDASRVSPFLDLLLFCVVRVLESCASSIPSTNNKQSAQPEDFSE
ITLPEGGKEAVSHVGVILTMASLAVKQFKDMRSLCLKIISFVLNKYEDHDFGPIFWDIFF
KAVKPLVHGFKQGGSSSEKPSSLFFCFLAMSQSPKLVPLLCREKNLIPDIFFILSVPTAS
EAIVYSVLKFIENLLTLEVELGIDCYIIEEVVCSNLEGLVDSLHHLFHNFTERRRKLHKH
PGETVLRVLKLLSKFIKDQSAARKFVDILLLLASDGIKNADVCMEALQILRDIVSALPSE
TNTRILKAISPILISAQRDVRLSVCDLFVALAENDSSMCSMVKLICELNATSEKEMGELD
FDIIINAYDRITADYFFGVSEDQALVILSHCIYDIKSDEIVLRQCAYKSLLSFVEFSALR
IGDGLEKQEIPAQMMAVHGSYWTGNRIQLVVNKFMLKHMGDAISKGTMQKEWIDLLHEMV
LKLSGIPSLGSLKVLCSEDAEVDFFNNIVHLQKHRRVRALSRFRNIVATGQLSEFMLKRV
FIPLFFSMLYDLQAGKGEHIRCACLDAVASISGQLGWKSYYALLMRCFRDMEKKHDREKV
LLRLVCSILDQFHFSETFSSQDLGFPGNDVTENDPKDISKLVMQPKCASSSVFSVIQACL
SGTVLPKLQKLLVSDPEKVNVSISVAILKVLKKLPGDTLDSQLSSIIHRISNFLKNRLQS
IRDEARCALVACLKELGYVYLKLVVKVLSATLKRGFELHVLGYTVNFILSKGLAESAGGV
LDFCLDELLRVVDNDVFGDVAEQKEVEKVAFKMKETRKQMSFDTLKLIAQNVTFKTHGLK
LLSPVTAHMQKHLTPKVKLKLETMLTHIAEGFEKNSSVDQTDLFIFIFGLIDDWLCEEKR
KKEALLVEGSGKDKSIDANSKVVMKCYVGTVPQCSYLFTVFGLRLLHNRLKNIKLHKGND
QLLSLMDPFIELLTSCLRSKYEEIVAGALKCIFPLTRLPLPSLESQADKIKVILLDIAQS
TFSVNSPVMQSCLKLLTTLLQSTNITLSADQLHILIQFPLFVDLERNPSFVALTLLKAIV
RRKLVVHEIYDLVNQVAELMVTSQEDAIRKKCSQILLQFLLNYQLSQKRRQQHLDFLVAH
LRYEHATGRAAVLEMLKTIIKRFPESIICEQSETFFLHLVLALANDHDNQVCSLIGIVIK
HLIGRINSQPLESILNICLAWYVGEKEQLRSPAAQVLGFVVEVMKRGFQKHINDILPVMK
MIVQSTIDVLNDGQLNISDPETIPFWKDAYYSFVLLEKILTQIPDLFFVEDIEDIWQAVS
ELLVHPHPWICNISGRLVALYFEQMVKQKKTIGTTCLTSTSRMFLIASSLCYRLKVQLPD
KGVRRLVKCNLAFTICGIQSLLRQLKFKDPCAVWDSLDPCEQGCFLKACQLLDPKSGRSI
TELFTCGGFNDEKIDQKNNDASYLLVSGILSTMGKTALQTEDSQTKMILGSLRMVAEKIT
QEDCQQYAYLLLFPIYKLCEGFAGKVVSDDVKQRAEKVREKIQEKLGTQSFVQSYNQMRY
DLGEKRFKRKQEEKVLAVTNPIRNAKRKMKISAKHQAHKKRKMMTIKMSRWMRH
NT seq
8085 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcggccaaggacgctcaagcagtgaaaactctcaacactactcctggccaccgc
aaccgccgctttgtgtacaaatctgttactcaaagaatcgaagagatagaaatcgatgtt
ttttggaatctccataccttgaaggctgagccatcttctagctcttatttcttagactgc
ctaatatattggagggagctaaatacagctgaggattttatttcattatatgaagagttg
atgccacttgtacaaaccttgcctttggttctgttacacaaggatatgataatctcaaga
ctgctgtctacgttgcaaatgaaagcgcggctttcgttagaggctattctcaggttgatc
gcggagttatcaagagatatactggaagactttatacccttttttccgaagattagtgag
tcttatttggctcttctaagagatggtgctgaccaggaaccagaaattattaagcagata
tttacctcatggtcatatataatggtgaatctaaaaaagtatctcatccaagatgttgtt
catgttctcaaggtatcagtcaaactaagatattaccccaaagaatttgtccaggagttt
atggctcaagcaatctcatatttgctgagacaatcatctgacggacaacttgaaaaaggt
gttaagaagattctatttgaagctgcaaaaaaaccatctcaggccaaaaaatccggagtt
agtgctttgttgtggtatactatgagaggaccatcgtctaagtttcattcaaaagcttgt
cgggtgctacaattattaacaaagcatgacttcttaagtataggtgacaagtttgatcaa
gggtctgacactgttgttgaaattgtgattactgctattgaaagatgtatggagttaaat
cttgctgagctgaacctgatatgggattgcttgtatgaagctattggtaattctgtatct
gggggatattcacaacatttatcccgtctgttatcagttcttatatcaactatttctttt
gatcatggtcggaatattagtgattacgatcaaatgttgaatctagtgggattgctcaag
ggggaatttattctaccatatatcagtggtgaaacggaggagctggtatctgaggctgct
gataagacatttcagcttatgttgtgtgttctcgatggcattcacagtaacaacaatttg
actgctatccctgaaattgccttgcagtgggcttctgtttttcaattaaggagctcaagt
ttgctgacattcttgaaagtgttggtcttgaaggactatgctatacttgcattccgaagt
aatattttaagtggttggttgaatgtgctggatattgcgaagggagaagctctagatctg
atgctggcattttgcgaaaggtttcaagttaaaacaggatctttccatgtactggaaggg
atattagaggaggtggttctaaagctcagttgtttctttcaaaagacaatctgccactgg
attgaagtgttaagtagcttaactcagggggatatgatagttgatcaagtagatgaggac
aatttggctttactttggggaaccatatgttgcatcccttatctcttacctgttgagggg
aatgtgcatctgatgggcttggtggatgtggttgatcagctattgatagctgaagcagat
gttgttactggagttcccaaaagaacttggcagggtctaattggtgctgctttacatagt
tatcacaacacaggaagacctgaaagatgtgaacttgaagatatcagtaagattttgcgt
cttggaaaaagttataaatcatcccaacaaatactgtctgctgttgcagattatttggat
tcgagttgcgggtctagtaaccacagtggtgtgataagacctccaaagcttgaaacagaa
gaagtgatagacgctatgaatgcattttcagagaacttgtacaatcctaacaaggagctt
cgtgtttcgacccttagaatattgtgtcattatgaactcttgagtcatgaatcgcagcag
atggatacaggagtttctgaagaaaagcacgccgacacccagtgttacaatgtgtttaac
ctgcttctatccattgagcaaacacccatctctgttgccacaagtagaaaggtcactttg
ctagtttctagaatacaggcttcactgtctgctccaggaacaactgaagtctatgtacta
cctgctttttatggcatcatcgggcttctgtataaccagtattcagatttatcaaactca
gctatagagtgtctttctgttatgatcagcaaatatcccgggattctttggaataggttt
atcagtttttttgagcaatgccagaccagctccttaaagactcatggtttagatatctca
aacatcgaatcatgtagcgagacaactgatttggtggaacatttccgctcgtattgtggg
acagtatccggtgacagttcaggatcatcgatattgtctctgctactccaagctttagag
aggattccaactgttaccgagtctcattctcgtcaaatagttccgttattcttcagattt
ctgggttacggagatgaaatcccttgtttggaatcatttaattctcaggcttgtggggga
aaggattggaaactcatactcacggagtggctaaacctattaaaattgatgaagaattcc
cgatcattttaccgcagtcaacttctgaaagaagttttggtgaataggttgcttgacaac
aatgatgttgagatacaaacaagggttttggattgtctcttgaattggaaggatagcttc
ttgctcccttatgagaagcaattgaataatcttgtcaattcaaaatgtttgagagaagaa
cttgctacctggagtttatctgtggagtctaatttggtagaagaagagcatagagctgaa
cttgttcctctggttattcggttgcttatgccgaaagtaagaagcctaaggaccctggcc
tcaagaaagcatgcaagtgtgaacaaccgaaaggcagtgctgggattcattgctcaactt
ggtgtttctgagcttgttcttttctttcaattattgatgaagtctttgcaaataactgat
cttggtaatgatggagtaggaagttatgcttgggtttctgggaaaagcaatttggatgag
ttggatttgtcaagttggtcgaatcttttcaccatggagaggatattggccatacccttg
aaaaagagatatgggtttttacatgtggttgaagaaattttcagaatatttgatgcttca
cgtgtcagcccgtttcttgaccttctgttgttttgtgttgtccgtgtattggaaagctgt
gcttcaagtattccctctacaaataataagcaatctgctcaacctgaagatttttctgaa
attaccttgccagaaggtggaaaggaagctgtgagccatgtaggggtaatactaacaatg
gccagcttggcggtcaagcaattcaaagatatgagatcgttgtgcttgaagatcatttct
tttgttcttaataagtacgaggaccatgattttggccccatattttgggatatattcttc
aaggcagtgaaacctttagtacacggattcaaacaggggggctcaagtagcgagaagccc
agttctttgttcttttgctttcttgcaatgagccagagtccgaaactagtacccctctta
tgcagagaaaagaacctgattccagatatcttttttattttatctgttccaacagcttcg
gaagccatagtttatagtgttctcaagtttatcgagaaccttttaactcttgaagttgag
cttgggatagattgttacattattgaggaggttgtatgttcaaaccttgagggtcttgtt
gacagcctgcatcatctatttcacaatttcactgaaagaagaaggaagttgcacaaacat
cccggggaaactgtgctgagagttctgaaattgttatcaaagttcataaaggatcaatca
gcggcgagaaaatttgtggatatcttgcttttacttgcgtcagatggaataaaaaatgct
gatgtatgcatggaagctttgcagatccttagagatatagtttcagccttaccgagtgaa
actaacactagaatcttgaaggccatatctcccatccttatttctgctcaaagagatgtg
cgcttgtcagtttgtgacctttttgtggctctagctgagaatgattcatccatgtgctct
atggtaaaactaatttgtgaattaaatgccacttctgagaaggaaatgggtgaacttgat
tttgatattatcatcaacgcttatgacagaataactgcagattacttctttggtgttagt
gaggatcaagcgttagtgatattatcccattgtatttatgacatcaaatctgatgagata
gtcttaagacaatgtgcatataagtcgctgctctcatttgttgaattctccgctttgaga
attggggacggattagagaagcaggaaattcctgcacaaatgatggcagttcatggtagt
tattggactggtaatcgcattcagcttgttgtaaataaattcatgttgaagcacatggga
gatgccattagcaaaggaacaatgcaaaaggagtggattgacttgttgcatgagatggtc
ctaaagctttcaggaatcccaagtcttggaagtttgaaggtcctctgcagtgaagatgct
gaagttgacttcttcaataacattgttcatttacagaaacacaggagagtcagggcattg
tcacgctttaggaatattgttgccactgggcagctttctgagttcatgctgaagagagtg
ttcatccccctctttttcagtatgttgtatgatttgcaagcaggcaagggagaacatata
agatgtgcttgcctggatgccgttgcttctatatctggtcagttaggatggaaatcatac
tacgctttactaatgaggtgttttagggatatggaaaagaagcatgatagggagaaggtc
ctgttacgcctcgtttgttctattcttgaccagttccatttttctgagaccttttcctca
caagacctggggtttcctggcaatgatgtaactgagaatgatcccaaagacatatctaaa
ttagttatgcaaccaaaatgtgctagttcttctgtgttttctgtgatacaggcctgtctt
agtggtaccgtgcttccaaaattgcaaaaactgcttgtttctgatccagagaaagtgaac
gttagtattagtgttgcgatactaaaagttttaaagaaacttcctggtgacaccttggat
tctcagctttccagtattattcatcggatatcaaacttcttaaaaaatcgtctgcagagc
atccgtgatgaagcaagatgtgctttggttgcatgtttgaaggaacttggatatgtgtac
cttaaacttgtagtcaaggtcttgagtgccacattgaaacgtggatttgagcttcatgtt
ctgggatataccgtcaactttatcttgtcgaaaggtcttgcagaatccgcaggaggcgtg
ctagacttttgtttggatgaactccttcgtgtggtagataatgatgtttttggtgatgta
gctgagcaaaaagaagtggaaaaggttgccttcaaaatgaaagagactagaaaacaaatg
tcttttgatacacttaagttgattgctcaaaatgtgactttcaaaacccatggtttgaag
ctgctctctccagtaacagctcatatgcagaagcatttgacacctaaagtaaaattaaaa
ttggagactatgttaactcatattgctgagggatttgaaaaaaactcctccgttgatcaa
actgatctctttatcttcatatttggcctaattgatgattggctttgtgaagaaaaacgt
aaaaaagaagctttattagtggaggggtcgggaaaagacaaatctatcgatgcaaacagt
aaagtggttatgaaatgttacgttggaactgtaccacagtgctcatatctttttacagtt
tttggtcttcgacttcttcacaatcgtttgaaaaatattaagcttcacaagggaaatgat
caactgctctcgttaatggacccctttatagagcttctgacatcttgtctgaggtctaag
tatgaagagatagtagctggtgcccttaagtgtatatttccgttgacaagattgcctctt
ccgtccctggaatctcaagctgacaagataaaagtgatactattggacattgctcaaagt
acatttagtgtaaatagtcctgtaatgcagtcctgtttgaaattattgaccaccctgctg
cagagcaccaatattaccctttctgctgatcaattgcatattttgatccagtttcctctt
tttgttgatcttgaaagaaacccctcttttgttgccttgacacttttgaaggcaattgtg
cgacgcaagcttgttgtccatgaaatatatgatctagttaatcaagttgcagaactaatg
gtaaccagtcaagaggatgccattcgcaaaaaatgcagtcagatattgttacaattcctg
ctcaactatcaactttctcagaaacgcagacagcagcatcttgatttcctcgttgctcat
ctaaggtatgaacatgccactggtagggcagctgtgctggaaatgctaaagacaattatc
aagaggtttcctgagagcataatttgtgagcagtcggagacgttctttctccatttagtg
cttgctttggcaaatgatcatgataatcaagtttgctccttgataggcattgttataaaa
catcttattggtcgcataaactcacaaccacttgagtccatcctgaatatctgccttgct
tggtatgtgggagagaaagaacagctgcggagcccagcagcacaggtccttggatttgtt
gttgaagtgatgaagagaggatttcagaagcacattaatgatatacttcctgtaatgaaa
atgatcgtgcagtctaccattgatgtcttgaatgatggacaactaaatatttcggacccg
gagacaattcccttttggaaggatgcttattactcttttgttttgttggaaaaaattctt
actcagattcccgacttattctttgtggaggacatcgaagatatatggcaggcggtctct
gagctccttgtgcatccccacccgtggatttgtaacatatccggccgtcttgtggcatta
tactttgagcagatggtaaagcaaaaaaagacaataggaacgacttgcctaacaagcaca
agtaggatgttcctgatagcttcctctctatgctatcgattaaaggttcaactccctgat
aaaggtgtaagaagacttgttaagtgcaatcttgcatttacaatatgcgggatacaatca
ttattgcgtcaattgaaattcaaggatccttgtgcggtttgggactcccttgacccgtgc
gagcaaggatgcttccttaaagcttgtcagttgcttgatccaaaaagcggaaggagtatt
acagagttgtttacttgtggtggattcaatgacgaaaaaattgatcagaaaaataatgat
gctagttatttgcttgtgtctgggatacttagcacaatgggaaaaactgcccttcaaaca
gaggattctcagacaaagatgattcttggcagtcttagaatggttgctgagaagatcacc
caggaagattgccagcagtatgcctatctgttgctgttcccaatttacaaactttgcgag
gggtttgctggaaaagtagtttcagatgatgtgaagcaacgtgcagaaaaggttcgtgaa
aagatacaggaaaaactcggtactcaaagttttgtacaaagttacaaccagatgaggtat
gatcttggagaaaaaaggttcaagaggaagcaagaggagaaggtgttggctgtaactaat
cctatcagaaatgccaagagaaaaatgaaaatttctgccaaacatcaagcccataagaag
aggaaaatgatgactatcaagatgagtagatggatgcgccattaa
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integrated database retrieval system
