Spinacia oleracea (spinach): 110799925
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Entry
110799925 CDS
T05137
Name
(RefSeq) E3 ubiquitin-protein ligase UPL3
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
soe
Spinacia oleracea (spinach)
Pathway
soe04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
110799925
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
soe04121
]
110799925
Enzymes [BR:
soe01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
110799925
Ubiquitin system [BR:
soe04121
]
Ubiquitin ligases (E3)
HECT type E3
110799925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
ARM_ARMC5
Arm
Motif
Other DBs
NCBI-GeneID:
110799925
NCBI-ProteinID:
XP_021860893
UniProt:
A0A9R0J3U7
LinkDB
All DBs
Position
4:175456596..175468178
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AA seq
1872 aa
AA seq
DB search
METRSRKRAEASPSAPSSSSAGPTTRAAKRTRLSSSSSSTTAATPATRSRTRSNISVSPA
TMDESSSRGGRRGRNHHGADKDNDKGKEKEHEVEKERENELGGLDVFDDDDDDNDNDDSE
GGGGVGLLHQNLTSASSALQGLLRKLGAGLDDLLPSSAMGSASSSSHQSGRLKKILSGLR
ADGEDGKQVEALTQLCELLSIGTEDSLSTFSVDSFVPVLVGLLNYESNPDIMLLAARAIT
HLVDVLPSSCAAVVHYGAVNCFCARLLTIEYMDLAEQSLQALKKISQEHPTACLRAGALM
AVLSYLDFFSTGVQRVALATAANMCKKLSSDAADFVMEAVPHLTNLLQYHDAKVLEHASV
CLTRIVEAFASSADKLDELCNHGLVTQVASLISTSNSGGGQASLSTPTYTGLVRLLATCA
SGSTVGAKTLLLLGVSGILKDILAGSGLVGNMSVSPALSRPPEQIFEIVNLANELLPPLP
QGTISLPASSNLFVRGPLFKKSPMSSSGKQDDNGNVQDVSAREKLLNDQPELLQQFGIDL
LPVLIQIHGSSVNGPVRHKCLSVIGKLMFFSNADMISSLNNTTNISSFLSGVLAWKDPQV
LVPALQIAEILMEKLPETFSKMFVREGVVHAVDSLIASPSNSVSAHTATPEKDTESTLGP
SARARRLRRRSGNHQQDAEELKNSVSVGGSPPTSVEVPTASSNLRTTVSGCAKSFKDKYF
PSDPGTVDVGISDDLLHLKNLCAKLNAGVEEQKSKVKGKSKTAGAYVAEFVTGKEESLVG
IVSEMLGELSKGDGVSTFEFIGSGVVAALLNYFSCGYFNKERILEVNLPKLRQQALKRYK
LFISIALPNEGNVVPMTILVQKLQNALSSLERFPVVLSHSARSSGGSARLSSGLSALSQP
FKLRLCRAAGEKSLRDYSNTVVLIDPLASLAAVEDFLWPRVQRTESGQKASTSVGNSESG
PLPTGAGASSPAASTPATSTRRQSTRARSGVNIGDTSRKDASQEKNNSSSKGKGKAILKP
GTEEIKGPQTRNAARRRAVSDKDAQLKSPTEESSSEDEDLEMSPVDIDDALVIEDDDISD
DEDDDQDDVLGDDSLPACMADKVHDVKLSDSAEDSAAAPATSDSQNNPASGSSSRAATVR
GSDSTDFRSGSSFGSRGAMSFAAAAMAGLASNGRGIRGGRDRHGRPLGSSGDPPKLVFSA
GGKQLNPNLTIYQAIQRQLVTDEEEDERYNGSDLVTSDGSRLWSDIYTVTYQRTDSQIEK
SHGAVNSASPSKSTKSGSSSNAVAASHRSPLDSILQGELPCDMEKNNPTYNILSLLRVLE
GLNQLAPRLRVQTASDKFSEGMISSLNELSISGARVLTSEFVNSKLTPKLARQIQDALAL
CSGSLPSWCYQLTKACPFLFPFETRRQFFYSTAFGLSRALYRLQQQQGEGQGSNEREVRV
GRLQRQKVRVSRNRILDSAAKVMEMYSSQKAVLEVEYFGEVGTGLGPTLEFYTLLSHDLQ
KVDLGMWRTNCSFDKSSMDIDSDDQSKKGKSEDASVLLSGGNANLVQSPLGLFPRPWPPS
ADALEGTHFSKVIEHFRLLGRVMAKALQDGRLLDLPLSTPFYKLVLGQELDLHDILSFDP
EIGKTLRELHALVCRKQYLESIGGDHPDVIAELCFRGTPIEDLCLDFTLPGYPDYVLRQG
DENVDINNLEEYISMVVDATVKTGVMRQIEAFRAGFSQVFDVTSLQIFSPDELDCLLCGR
RELWKPDMLVDHIKFDHGYTAKSPAIVNLLEIMGEFTPEQQRAFCQFVTGAPRLPPGGLA
VLNPKLTIVRKHSSTATTASNGTGPSETADDDLPSVMTCANYLKLPPYSTKEVMLKKLLY
AINEGQGSFDLS
NT seq
5619 nt
NT seq
+upstream
nt +downstream
nt
atggaaactcgtagccggaagcgggcggaggcgtccccatcagccccttcttcatcttct
gcaggtcccacaactcgcgcagcgaaacgaacccgtctttcttcttcttcctcttccaca
accgctgctaccccggctactcgctctcgaactcgctctaacataagtgtgtctcctgca
acgatggatgagtcatcctctcgtggtggccgaagaggcagaaaccatcatggcgctgat
aaggacaacgataaggggaaagagaaggagcatgaagttgagaaagagagagaaaacgaa
ttaggaggactggacgtttttgacgatgatgatgatgataatgacaatgatgatagtgaa
ggaggtggcggtgttggtcttttacaccagaatctaacctctgctagcagtgccctccag
gggttgcttcgaaagctaggtgctgggctcgatgatttgctcccttcgtcagctatgggt
tcggcctcctcttcgtcccaccagagtggaaggctcaagaagatactttctggattaaga
gctgatggtgaggatgggaagcaagtcgaagctttgactcagttgtgtgagttgctgtca
attgggactgaggattcacttagtacgttttccgtggattcgtttgttcctgtgcttgtg
gggttgcttaattacgagagtaatcctgatattatgcttcttgctgcgagggcgattact
catttggtcgatgtcttgccttcttcttgtgctgctgttgttcattatggcgcggttaat
tgtttctgtgctaggctgttgacaattgaatatatggacttggctgagcagtcgctgcaa
gcactaaagaagatatctcaagagcatccaactgcgtgcttgcgagctggtgcgctaatg
gcagtgctttcttatctcgatttcttttcaactggagttcagcgagtggcattagctact
gctgcaaatatgtgcaagaagctctcttcggatgctgccgattttgttatggaagctgtt
cctcatttaacgaatctccttcagtaccatgatgcaaaggttttagagcatgcttctgtt
tgccttactcggattgttgaggccttcgcatcatctgctgacaaacttgacgagctttgc
aatcatgggcttgttacccaggtcgcttcacttatttcaaccagtaattctggtgggggt
caggcctccctcagcacgcctacttacacaggcttggtccgacttcttgctacatgtgca
agcgggtctactgtgggagcgaagacactgctgcttctaggtgtaagtggcattctcaaa
gatattttggccggatcaggacttgtgggaaatatgtctgtatcccctgctcttagccgg
ccaccagaacagatatttgagattgtgaaccttgcaaatgagctgcttcctccacttccg
caaggaaccatttcccttccagctagctctaacttatttgttagaggtcccctttttaag
aagtcgcctatgagcagttctggcaagcaagatgataatggaaacgttcaagatgtgtca
gcaagagaaaaactcctgaatgatcagccagagcttctgcagcaatttggaattgacctt
cttccggtcttaatacagattcatggatcaagtgtgaatggtcctgtccgtcacaaatgc
ctttcagtgattggtaaactaatgtttttcagcaatgcggatatgatttcatctctgaat
aacacaacaaatatatcaagtttcctttctggtgttttagcttggaaggatccacaagta
ttggtcccggcactacaaattgcagagatactgatggaaaaactccctgagacgttctcc
aagatgtttgtgagagaaggtgtggttcatgctgtggattcgctcatagcttctccatca
aactctgtttcagctcacactgctacccctgaaaaagatactgagtcaacattgggtcca
tctgcacgagcgagacgtttaaggcgtcgaagtggaaaccatcaacaagatgcggaagag
ttgaagaattcagtttcagttggtggttcacctcctacctctgttgaagttccaactgcc
agttccaatcttcgcacaactgtcagtggttgtgcgaagtcttttaaggacaaatacttc
ccttctgatcctgggactgttgatgttggtatatctgatgacctcttgcatctgaagaat
ctatgtgcaaagttgaatgctggtgttgaggagcagaagtctaaagtgaaaggaaaatct
aagactgctggtgcttacgttgcagaattcgtaactggcaaagaggagagcttggttgga
atagtgtctgagatgctaggggaactaagcaaaggggatggtgtttctacatttgaattc
attggcagtggagttgttgctgccttactgaactacttttcctgtggttactttaacaag
gaaagaattttggaggtgaatcttcctaagcttagacaacaggcactcaaaagatacaaa
ttgtttatctccattgcccttcctaatgaagggaatgtagtccctatgactattttagtc
caaaagcttcagaatgctttgtcttcgctggaaaggtttccagtagtattaagtcattca
gctaggtcatcaggtggcagtgcacggctgtcatcaggtttaagtgcattatctcaacca
ttcaagttgcgtctatgtagagctgcaggagagaagtctcttcgtgattattctaatact
gttgtacttatcgatccattagcaagtttagcagctgttgaggacttcctttggccccga
gttcaacgaactgagtctgggcagaaggcttcaacttctgtgggaaattctgagtcaggg
ccattacctacaggtgctggtgcttcatcaccagctgcctccacccctgctactagcact
cgtcgccagtcaaccagagcaagatcaggtgttaatataggagacacttccagaaaagat
gcatctcaggaaaaaaataatagctcttccaaggggaagggtaaagctatactaaagcca
ggaacagaggaaataaaaggtcctcaaacaaggaatgccgctcgtagaagagctgtttca
gataaagatgctcaactaaaatcacccactgaagaatctagttctgaggatgaagatttg
gagatgtctcctgtcgacatcgatgatgcattggtgattgaagatgatgacatctctgat
gatgaagatgatgatcaagatgatgtactgggagatgattctcttcctgcttgcatggcg
gacaaagtgcatgatgtaaagttgagtgattctgctgaagacagtgctgctgcccctgcc
actagtgatagtcagaacaatcccgcttcaggctccagtagtagagctgccactgtaagg
gggtcagattctacagattttcgaagtgggagttcatttggttcaaggggtgcaatgtca
tttgctgctgctgccatggctgggcttgcttctaacggcaggggaattaggggaggcaga
gatcgccatggtcgtcctcttggcagttccggtgaccctcctaagttggttttctctgct
ggtggcaagcaacttaatccgaatttgacaatctaccaggctatccagcgtcagcttgtg
actgatgaagaggaagatgagaggtacaatggtagtgatcttgttaccagtgatggtagc
aggctatggagtgatatttacactgtcacttaccaaaggacagatagccagattgagaag
tcccatggggctgtgaattctgcctctccatcaaagtctactaaatctggttcgagttca
aatgctgttgctgcctcacaccggtcacctctggacagcatcttgcaaggggaacttccc
tgtgatatggagaaaaataatccaacatataatattttatcattgctacgtgtacttgaa
ggtttgaatcaacttgcaccccgtttgagggttcaaacagcttctgataaattctcggaa
gggatgatttcaagtttaaatgagttaagtatttctggagctagggttcttacttcagaa
tttgtcaacagcaagctcacccccaaattagctcgacagatacaagatgcacttgcacta
tgcagtggtagtctgccgtcctggtgctaccagctgacaaaagcatgtccatttttgttt
cctttcgaaactcgcaggcagtttttctattcaactgcctttggattgtctagggccttg
tatcgtttgcagcagcaacagggtgagggtcaggggtctaatgaaagagaagttcgagtt
gggaggttacaacgtcagaaggttcgtgtatcaagaaatcgcattttagattcggcagcg
aaagtaatggaaatgtattccagccaaaaggctgtccttgaagttgagtattttggtgag
gttgggacaggattaggtccgacattggagttctacacacttctgagtcatgacttgcag
aaagtggatttgggaatgtggaggacaaattgttcatttgacaagtcatctatggacatt
gacagtgatgatcagagcaaaaaagggaaatctgaagatgcctcagtattgttatcgggg
ggtaatgcaaatcttgttcaatctcctcttggattgtttcctcgaccatggccgccaagt
gctgatgctttagagggtacccattttagcaaagtcattgaacattttcgactgctcgga
cgagtaatggctaaagctcttcaggatggaaggctcttggatctgccattatctacacca
ttttacaaacttgtgctcgggcaggagcttgatttgcatgatatcctttcatttgatccg
gagattgggaaaacgttacgagaattacatgccttagtttgcagaaagcagtatttagaa
tcaataggtggtgatcatccagatgtaatagcggagttgtgctttcgtggaactccaatt
gaggatttatgtttggatttcacacttcctggatatccagattacgtcttgagacaaggg
gatgaaaatgtggacatcaataatttggaggaatacatatcaatggtggtggatgccaca
gttaagactggagttatgagacaaattgaagcttttagagcaggatttagccaggttttc
gacgtgacatctttacagatattttctccagacgagcttgattgcttgctgtgtggccgt
agagagttgtggaagcctgatatgcttgttgatcacattaaatttgatcatggatacacg
gccaaaagccctgcaatcgttaatttacttgagattatgggtgagttcacaccagaacag
caacgcgctttttgtcaatttgtcactggtgccccacgtcttccaccaggtggtttggct
gttctaaaccccaaattgactattgtgagaaagcattcttcaactgccaccaccgcttca
aatggaacagggccttcagaaactgctgatgatgatttgccaagtgtgatgacctgtgct
aattacctgaagcttcctccttactcgacaaaggaggttatgttgaagaagttgctttat
gctatcaacgaaggacaaggttcatttgatttgtcatga
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