KEGG   Spinacia oleracea (spinach): 110800178
Entry
110800178         CDS       T05137                                 
Name
(RefSeq) splicing factor U2af large subunit B-like isoform X1
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
soe  Spinacia oleracea (spinach)
Pathway
soe03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:soe00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110800178
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:soe03041]
    110800178
Spliceosome [BR:soe03041]
 Complex A
  U2 snRNP components
   U2 related factors
    110800178
 Complex B
    110800178
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_occluded
Other DBs
NCBI-GeneID: 110800178
NCBI-ProteinID: XP_021861160
UniProt: A0A9R0K7A2
LinkDB
Position
4:complement(176071512..176080898)
AA seq 562 aa
MSEYQDDPETNGSSPQPQENDHGGLDENNSKSRHGSRDYERGSSKSRERDREKVRDRDRD
RDKDRDKERDRDRERERDKDRTRDRDRDRDRDRHRDRHRDRSDRGDRHKDREADDDYHKS
RDRDRRRDSDRDRDEKHRSRSRARSEHRSRSRSRSRSKSKRISGFDMAPPASAMLTSAAA
FTSQIPGAAPTIPGMFPNMLQLTPGQPLGPLPIMPMQAMTQQATRHARRVYVGGLPPSAN
EQSVATFFSHVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFE
GTPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYLT
EPQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYNDPSVTDVACAALNGIKMGDKTLT
VRRANQGAVQPKPEQEIVLQHAQQQILLQKLMFQPGALPTKVVCLTEVVTADDLKDDDEY
QDIMVDMKEEGEKFGSLVKVVIPRPGPNGELLPGVGKVFLEYADTESSSRARAGMNGRKF
GGSQVVAVFYPEHKFEEGVYDG
NT seq 1689 nt   +upstreamnt  +downstreamnt
atgtcggaataccaggacgatcctgagacaaatggttcgtcgcctcagcctcaagaaaat
gatcatggtggcctagatgaaaacaactccaaatctcggcatggttctcgtgattatgag
aggggctcttcaaaaagtagagaaagggaccgtgagaaggtacgagatcgagacagggat
agagacaaggatagggacaaggaaagggatagggacagggaacgggaaagagacaaagac
aggactcgtgatcgcgatcgtgatcgtgatagagatcgtcatagagatcggcatagggat
aggagtgatagaggtgatcgccacaaagatagagaggctgatgatgattatcataaaagt
cgagatcgtgacaggcggagagattctgatcgtgatagggatgaaaaacacagatctcgt
tcaagggcaagatctgagcacagatcaaggtctcgatctcgttctcgctccaaaagcaaa
aggataagcgggtttgacatggcacctcctgcttctgcaatgttaacttcagctgcagcc
tttacaagtcagattcctggagcagctccaacaatccctggaatgttcccaaatatgtta
cagctgactcctggacagccactaggacctcttcctattatgcctatgcaagccatgact
cagcaggctactcgacatgctcgacgagtatacgttggtggacttcctccttcagctaat
gaacagtctgtggcgaccttttttagccatgttatggccgcaattgggggaaatactgct
ggaccaggtgacgctgttgtgaatgtttatataaatcacgaaaagaagtttgcttttgtt
gagatgaggtctgtggaggaagcaagcaatgctatggccttagatggtatcatatttgag
ggtacacctgttaaggtgagaagacctagtgactacaatccaagccttgctgcaaccctt
ggtcccagtcagcccaatccaaatctgaacttggctgctgttggactaacacctgggtca
gctggtgggctcgagggcccagatcgtatttttgttggtgggctaccttactacttaact
gaaccacagattcgggaattattagaatcttttgggccccttcgtggttttgatctcgtg
aaggacagagaaactgggaactcaaagggctatgccttttgtgtttacaatgatccttcg
gtcactgatgtagcttgtgcagctttgaatggaattaaaatgggtgataaaacactcaca
gtaagacgtgctaatcagggagcagtccaacctaagcccgagcaagagattgtattgcag
catgcacaacagcagattctgttgcagaagctcatgtttcaacctggagcactccctacc
aaggttgtttgtttaaccgaagtggttactgcggacgatcttaaagacgatgacgagtat
caagatataatggtagacatgaaagaggagggtgaaaagtttggctctctggtgaaggtt
gtcatcccacgaccaggaccaaatggagaacttttacctggagttggaaaggtgtttcta
gaatatgctgacacggagagttcctccagagcaagggcgggaatgaatggaaggaaattt
ggcggaagccaagtggttgcggtgttttatcccgaacataaatttgaggagggtgtctat
gatggatag

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