Spinacia oleracea (spinach): 110800787
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Entry
110800787 CDS
T05137
Name
(RefSeq) aladin
KO
K14320
aladin
Organism
soe
Spinacia oleracea (spinach)
Pathway
soe03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110800787
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
soe03019
]
110800787
Messenger RNA biogenesis [BR:
soe03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
110800787
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ANAPC4_WD40
WD40_WDHD1_1st
WD40
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_EML_2
Beta-prop_RIG_2nd
WD40_Prp19
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_2nd
PD40
Motif
Other DBs
NCBI-GeneID:
110800787
NCBI-ProteinID:
XP_056691119
UniProt:
A0A9R0K7U6
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Position
1:complement(20323152..20332198)
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AA seq
439 aa
AA seq
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MPSFPQPGTVTICEINRDLITADTLSDDRANECYGKALGVVFSPVEFQPESLISPTRDNA
GGQLGVVQEKGLSALIGAVKRIFHPNDMHLLPEVNLQGVSWHQHKHILAFISGPNQVTIR
DFDDTEGKDPSILHGDFQREVKLVEWRPNGGRTLSVACKGGICIWAASYPGNPASVRSGA
SPFVGSISKGSGMRWTLVDFLKSNSDEHISALSWSPDGRYLATGSYESSAFTIWDVSQGD
GTPIRRGLGGISVLRWSPTGDYFFAAKFDGTFYLWETGTWTSQPWSSSSGFVTGATWDPE
GRMILLAFSKSSTLGSIHFASKPPSLVAHLLPVDLPEIATLTGSQQIEKIAWDASGERLA
VSFKEGDESYRGLIAIYDVRRTPLIAASLVGFIRGPGDNPKPIAFSFHDKFKQGPLLSVC
WSSGFCCTYPLLFRSHILP
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgccgtcgtttccgcaaccaggcaccgttaccatctgtgaaatcaaccgagacctcatt
actgctgatactttatccgacgatcgagctaatgaatgctacggaaaagctcttggtgtt
gtattcagtcctgtggaatttcaaccggaaagtctaatatcgccgactcgcgataatgcg
ggtggtcaactaggagtcgtccaggagaagggtttatcagctttaattggtgctgtaaaa
cggatttttcaccccaatgatatgcatttgctgcctgaagtgaatttacaaggagtatcg
tggcaccaacacaagcatatattggcatttatatccggaccgaatcaggtcacaattcgt
gattttgatgatactgagggaaaggatccaagcattttgcatggcgattttcagagagaa
gtcaaacttgttgagtggaggccaaacggtgggagaacgctttctgtagcatgcaagggt
ggaatttgcatatgggctgcttcatatcctggcaatccagcatctgtaagatctggggct
tccccttttgtgggctccatttcgaagggctctggcatgagatggacgttggtggatttt
ctcaagagtaacagtgatgagcacataagtgcactgtcttggagtcctgatggaagatac
ttagcaacaggatcttatgagagctcagcctttacgatttgggatgtttctcaaggtgat
gggactcctattcgacgaggattgggaggcatatcagtcttgagatggtcgcctactgga
gattacttttttgcagctaagtttgatggaacattttatttgtgggagactgggacttgg
acatcacaaccatggtcgtcaagtagtggttttgttacgggggcgacatgggatcctgaa
gggcgtatgatattgcttgccttctcaaaatcttctactttgggatccattcactttgca
tcaaagcctccatctcttgttgcacacttactccctgttgatctgccagagatagcaact
ctaacgggcagtcaacaaattgagaaaatagcttgggatgcatcaggagaacgcttagcc
gtatctttcaaagagggagatgaatcttaccgtggtcttattgccatatatgacgttagg
aggacgcctctgattgcggcatctctagttggatttatcagagggcctggggacaatcca
aagccaattgcattttctttccacgacaagttcaaacagggacctttgctatctgtgtgt
tggagtagcggtttctgctgcacctatccccttttattccgctctcatattcttccttag
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