Spinacia oleracea (spinach): 110800971
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Entry
110800971 CDS
T05137
Name
(RefSeq) eukaryotic initiation factor 4A-3
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
soe
Spinacia oleracea (spinach)
Pathway
soe03013
Nucleocytoplasmic transport
soe03015
mRNA surveillance pathway
soe03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110800971
09122 Translation
03013 Nucleocytoplasmic transport
110800971
03015 mRNA surveillance pathway
110800971
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
soe03019
]
110800971
03041 Spliceosome [BR:
soe03041
]
110800971
03009 Ribosome biogenesis [BR:
soe03009
]
110800971
03012 Translation factors [BR:
soe03012
]
110800971
Enzymes [BR:
soe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110800971
Messenger RNA biogenesis [BR:
soe03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
110800971
mRNA cycle factors
Stress granule specific factors
110800971
Spliceosome [BR:
soe03041
]
Complex C
Other components
EJC/TREX
110800971
Ribosome biogenesis [BR:
soe03009
]
Eukaryotic type
90S particles
Helicases
110800971
Translation factors [BR:
soe03012
]
Eukaryotic type
Initiation factors
eIF-4
110800971
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
AAA_19
ResIII
AAA_30
Cas3-like_C_2
NAT10_TcmA_helicase
StrH_N
CMS1
Motif
Other DBs
NCBI-GeneID:
110800971
NCBI-ProteinID:
XP_021861976
UniProt:
A0A9R0J6V0
LinkDB
All DBs
Position
2:2527792..2536779
Genome browser
AA seq
407 aa
AA seq
DB search
MASGSVVPANRGRRNHTEDEKLQFEATEGIEPITSFERMGIKDDLLRGIFAYGFEKPSAI
QQRAVMPIIQGRDVIAQAQSGTGKSSMISLAVCQMADTSTREVQALILSPTRELATQTEK
VIMAIGLHMNIQAHACVGGKSVGEDIRKLEYGVHVVSGTPGRVCDMIKRRTLRTRNIKLL
ILDESDEMLSRGFKDQIYDVYRYLPPELQVVLISATLPNEILEITSKFMTDPVKILVKRD
ELTLEGIKQFFVAVEQEDWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRNNNFTV
SSMHGDMPQKERDAIMKEFRDGDTRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHR
IGRSGRFGRKGVAINFVKKDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcaggctcggtggtgccggcaaacagagggcggagaaaccacaccgaagacgag
aagctacagttcgaggcgacagaaggcatcgaaccaataaccagcttcgaaagaatgggg
attaaagacgaccttttgcgcgggatctttgcttatggatttgagaagccgtctgcaatt
caacagagggctgttatgccgattattcaaggtcgtgatgttattgcccaagcccagtct
ggtactggaaaatcttccatgatttcccttgctgtttgtcagatggctgatacttctact
cgagaggtccaagcattaatcttgtcgcccactcgggagctggctactcaaacagaaaaa
gtaataatggccatcggtctccacatgaatatacaagctcatgcatgcgttggagggaaa
agtgtgggcgaggatatcaggaaattggagtacggagttcatgttgtttcaggaacccca
ggtagagtttgtgatatgatcaagaggagaacactaagaacccgaaatatcaagctctta
attcttgatgagtctgatgagatgttgagcagaggttttaaggaccaaatttatgatgta
tatcgttaccttccaccagagcttcaggttgtgctgatctctgccactctccccaatgaa
attctggagattaccagcaaatttatgacagatcctgttaaaatccttgtaaaacgtgat
gaattgactttagagggcatcaagcaattctttgttgcggttgagcaggaagattggaag
ttcgataccctttgtgatctttatgatactctcacaattactcaagccgtgatcttctgc
aatactaaacggaaggtggattggctgactgagaagatgcgcaacaataacttcactgtt
tcatcaatgcacggagatatgccacagaaagagcgcgatgctataatgaaggagttccgt
gatggcgacactcgtgttttgatcacaacagatgtttgggcacgtggaattgatgtccag
caggtttcattggttatcaactatgatttacctaacaatcgtgaactttatattcatcgg
attggtcgctctggtcgttttggacgcaagggtgttgctattaacttcgtgaagaaggat
gacatcaggattctaagagacattgagcaatattacagtacccaaattgatgaaatgccg
atgaatgtggctgatttgatatga
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