Spinacia oleracea (spinach): 110801249
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Entry
110801249 CDS
T05137
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 37-like
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
soe
Spinacia oleracea (spinach)
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
soe03019
]
110801249
03041 Spliceosome [BR:
soe03041
]
110801249
03036 Chromosome and associated proteins [BR:
soe03036
]
110801249
Enzymes [BR:
soe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110801249
Messenger RNA biogenesis [BR:
soe03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
110801249
mRNA cycle factors
Common to processing body (P body) and stress granule
110801249
Spliceosome [BR:
soe03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
110801249
Chromosome and associated proteins [BR:
soe03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
110801249
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
110801249
NCBI-ProteinID:
XP_021862280
UniProt:
A0A9R0J942
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Position
3:complement(31187153..31195496)
Genome browser
AA seq
620 aa
AA seq
DB search
MRTSWADSVAAAENENGASGTTRPTKATYVPPHLRNRPPSADSSAGPPQVAPPQVNDKPV
LGAPPAAARWAGGSRPDMGRGGGGGVGYGGGRGGGVGWNNRGGGWDRGRDREVNPFANDV
DDEPEEAFGEQENSGINFDAYDDIPVETSGDNVPPPVNTFADIDLGNELNANIRRCKYVK
PTPVQRYAIPISLAGRDLMACAQTGSGKTAAFCFPIISGIMKSPQPPPKPRSRAAFPLAL
ILSPTRELSVQINEEARKFAYQTGVRVVVAYGGAPISQQLRELERGVDILVATPGRLVDL
LERARVSLENIRYLALDEADRMLDMGFEPQIRKIVEQTQMPDRGLRQTMLFSATFPKEIQ
RLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLIHAQRANGVHGKQALT
LVFVETKKGADALEHWLGMNGFPATSIHGDRTQQERELALRSFKTGNTPILVATDVAARG
LDIPHVAHVINFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNQSLARPLAELMQEAN
QEVPEWLVRYASRASYGGGRNRRSGGGRFGGRDFRRDGGFNRGGGGGSDYYGGSNSGGSH
YAGGGGGGGGYNPGASSAWD
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgagaacttcatgggctgattccgtagcggcagcagagaatgagaatggagctagcggt
acgactaggccaactaaggctacctatgtaccaccacatcttcgtaacaggcctccatca
gcggactcgtctgctggcccaccgcaggttgcaccacctcaggttaatgataagcctgtt
ctaggtgctcctcctgctgcggcccgatgggctggtggttctagacctgatatgggtcgt
ggcggaggcggtggagttggctatggtggtggtcgtggaggtggagttggatggaataac
aggggtgggggttgggaccgtgggagggacagggaggtaaatccttttgctaatgatgtt
gacgatgaaccagaagaggcatttggtgagcaggagaattccggcatcaactttgatgct
tatgatgatatccctgtggagactagcggggacaatgtgccaccccctgtaaataccttt
gccgacatagaccttggaaatgagctgaatgcaaacataagaagatgcaaatatgtgaaa
cctacaccagttcagcgctatgctatcccaatttcccttgctggacgggatttgatggct
tgcgctcagactggttctggaaaaactgcagctttctgctttccaattattagtggtata
atgaagagtccgcagcctcctccaaagcctcgatctcgagctgcctttccacttgccctt
atcctatccccaactagggagttgtcagtgcagataaatgaggaagctcgaaaatttgca
taccaaactggtgtcagggtggtggttgcttatggaggagctccaatcagccaacagttg
cgagagcttgaaagaggagttgatattcttgttgcaactcccggaagactggtagacttg
ctagagagggctagagtgtcacttgaaaatattagatacctggcacttgatgaggccgat
agaatgctggatatgggttttgagccccaaattagaaagattgttgaacagactcagatg
ccagatcgaggcctcagacagacaatgctgttcagtgcaactttcccaaaggaaatacag
aggctggcatctgattttctagccaattacattttcctggctgttggaagagtggggtcg
agcactgatttgatagttcaaagggttgagtttgtgcatgagtctgacaagaggagccac
ttgatggaccttattcacgcacaaagagcaaatggagtacatgggaagcaagcattgaca
cttgtttttgtggagaccaagaaaggtgccgatgcgttggagcactggttgggtatgaat
gggtttccagcaactagtatacatggagatcgaacacaacaggaaagagaacttgcgtta
aggtcatttaaaactggaaatacacctatcctggttgcaactgatgtggcagctcgaggt
ctggatatacctcatgttgcgcatgtgatcaactttgatctcccaaatgacatagacgat
tacgtccatcggatagggcgaacagggagagccgggaaaagtggactggcaacagccttt
ttcaatgaaaataatcagtcgctagctagaccgcttgctgagctgatgcaagaagcgaac
caggaagttccagaatggctggtacgttatgcatcacgtgcatcctatggcggaggaaga
aacaggcgatctgggggtgggcgctttggaggtcgtgactttaggagggatggtggcttc
aacagaggtggtggtggaggctctgattattatggtgggagcaacagtggagggagtcat
tatgcaggtggaggtggaggtggaggtggttataatcctggtgcatctagtgcctgggat
tag
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