Spinacia oleracea (spinach): 110801406
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Entry
110801406 CDS
T05137
Name
(RefSeq) coatomer subunit alpha-2-like
KO
K05236
coatomer subunit alpha
Organism
soe
Spinacia oleracea (spinach)
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
soe04131
]
110801406
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
soe04147
]
110801406
Membrane trafficking [BR:
soe04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
110801406
Exosome [BR:
soe04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
110801406
Exosomal proteins of bladder cancer cells
110801406
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
WD40
WD40_Prp19
WD40_WDHD1_1st
WDR55
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
EIF3I
TPR_COPA_B
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_SCAP
Beta-prop_IFT122_1st
WD40_RFWD3
Beta-prop_DCAF4
Beta-prop_SPT8
NBCH_WD40
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Herpes_UL47
Motif
Other DBs
NCBI-GeneID:
110801406
NCBI-ProteinID:
XP_021862452
UniProt:
A0A9R0J6R4
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All DBs
Position
2:complement(93927249..93933032)
Genome browser
AA seq
1213 aa
AA seq
DB search
MLTKFETKSNRVKGLSFHPKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVDFH
KTQPLFVSGGDDYKIKVWNYKLHRCLFTLLGHLDYIRTVQFHHESPWIVSASDDQTIRIW
NWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGSLRKKSVSPADDILR
LSQMNTDLFGGVDAVVKYVLEGHDRGVNWASFHPTLPLIVSGADDRQVKIWRMNDTKAWE
VDTLRGHMNNVSCVLFHARQDIIVSNSEDKSIRVWDATKRTGLQTFRREHDRFWILTAHP
EMNLLAAGHDSGMIVFKLERERPAFAVSGDLVYYVRDRFLRVYEFSTQKDTQVIPIRRPG
ATLLNQSPRTLSYSPTENAVLISSDIDGGSYELYIVPKDGWGRGDLVQEAKRGLGSSAVF
IARNKFAVLERSSNQVLVKNLKNETGKKVALPAITDAIFYAGAGNLLCRAEDRVLVFDPQ
QRIVIGELQTSFVRYVVWSNDMESVALLSKHSIIIATNKLEHRCTLHETIRVKSGAWDDN
GVFIYTTLNHIKYCLPNGDNGIIRTLDVPLYITKVSGNTIFCLDRDGKNRVISIDATEYY
FKLSLLRKRFDQVMGMIKRSELCGQAMIAYLQQKGFPEVALHFVKDEKTRFNLALESGNI
EVAVASANVIDDKTHWYRLGVEALRQGNADIVEYAYQKTKNFERLSFLYLITGNMEKLSK
MLKIAEVKNNIMGQFHNALYLGDAQERVKVLEAAGHLPLAFITAKVHGLDDDAERLAAEL
GDDIPEVPKGKSQSLLIPPSPISCGANWPLLTVMKTMFDGLDHVRDTPDEDEEAAEWVEA
LEINEDIQNVVFSDLDEEEGVHEDNDNGTGWEIDENLDLPPEVESPKVTSNGRSSVFVAP
TPGMPVSQIWTQRSSLAAEYVAAGSFDTAMRLLTRQLGIKNFAPLKPLFIDLFSASHSYL
LAFASAPVISVALERGWNELSSPNVRGPPALIFSFSQLEEKLRAGYKLTTSGKLSDALRT
FTTILHTIPLIVVESRREVDEVKELITIVKEYVLGLKMELKRRELKDNPVRQQELAAYFT
HCNLQKPHVRLALLTAMTNCYKAGNLNTAANFARRLLETNPTVESQAKTARQVLQAAERR
MTDSTELNYDFRNPFVVCGATYVPIYRGQKDVSCPYCSSHFVPDQNGQICAVCDLAVIGA
DASGLLCSTAQKR
NT seq
3642 nt
NT seq
+upstream
nt +downstream
nt
atgttgacgaaattcgagacgaagagtaatcgagtgaaaggactgagtttccacccgaaa
cggccatggatcttggcgagtttacacagcggtgtgatccaattgtgggattatcgtatg
ggaacactcattgatcgttttgacgagcacgacggcccggttcgcggtgttgattttcac
aaaactcagcctcttttcgtctccggaggggatgactataagattaaagtatggaactat
aaattgcatagatgcctatttactcttctaggacaccttgactacatccgtaccgtccag
tttcaccatgaatctccttggattgtcagtgctagtgatgaccagaccataaggatttgg
aattggcagtcacgtacttgtatctctgtgctgactggacacaatcattatgttatgtgt
gcctcctttcatcccaaggaagacctagtagtttctgcttctttagatcagacagtccgt
gtttgggatattggttccttgaggaagaaaagtgtttctcctgcagatgacatcttgcga
ttgagtcagatgaacacagatctgtttggaggtgttgatgctgttgttaagtatgtcttg
gagggtcatgatcgaggagtcaactgggcttctttccatccaactcttcctttgattgtg
tctggtgctgatgatcgtcaagttaaaatctggcgtatgaatgataccaaagcttgggaa
gtggacactttgagggggcacatgaataacgtttcttgcgttctctttcatgctaggcag
gatattattgtctcaaactcagaggacaaaagtattcgtgtgtgggacgctaccaaaaga
actggtctccagacatttaggagggagcatgaccgtttctggattctgacagcacatcct
gagatgaaccttctggctgctggtcatgatagtggaatgatcgtctttaaattggaaaga
gaacgacctgcatttgcagttagtggtgatctggtatactatgtaagggatcgttttcta
cgggtttatgagttctcgacccagaaggacactcaagtcatccccatacgcagacccggt
gcaaccttactcaaccaaagcccaagaactctttcttacagtccaaccgaaaatgctgtt
ctgatttcttctgatatagatggtggatcttatgaactctatatagtaccaaaggatggc
tggggtaggggtgatttggtacaagaggcaaagagaggtcttggcagttcagcagttttt
attgctcggaacaaatttgctgtattagagaggagcagcaaccaagtattagtgaagaac
ctgaagaatgagactgggaaaaaggttgcccttcctgctataactgatgctatattttat
gccggagctggaaaccttctttgtagggctgaagatagagttctggtttttgaccctcag
cagaggattgtaattggggaactacagacttcttttgttagatatgttgtctggtcaaat
gacatggaaagtgttgctctgttgagcaaacactctataattatagccaccaacaaactt
gaacaccgatgcacacttcatgaaaccatccgtgtgaagagtggagcctgggacgacaac
ggtgtattcatatacacaactcttaatcacataaaatactgtcttcccaatggggacaat
ggtataattcggactcttgatgttccgctctacatcacaaaagtgtcagggaacaccata
ttttgtttagatagagatgggaaaaaccgtgtcatctccatagatgcaactgaatattat
ttcaagctttccctcttgaggaagagatttgatcaggtgatgggaatgattaagcgttcc
gagctttgtggacaagccatgatagcctatcttcagcagaagggttttccggaggtcgct
cttcactttgtgaaggatgagaagactcgctttaatctggccttagaaagtggtaatata
gaagtagctgttgcttctgctaatgtgattgatgacaaaacccactggtacaggttgggg
gttgaggcccttcgccagggtaatgcagacattgtggaatatgcatatcaaaaaacaaaa
aactttgagaggttgtcattcctttatctcataactggaaatatggagaaattgtccaaa
atgctaaaaattgctgaagtgaagaataatattatggggcagttccacaacgctctttat
ctgggtgatgctcaagagcgggttaaggttcttgaagctgctggccatttgcctcttgct
tttatcactgccaaagtccatggacttgatgatgatgccgagcgtctagctgctgaactt
ggggatgacattcctgaagtccccaagggaaagtcacaatctctcttgataccgccaagt
cccataagctgcggtgcaaactggccattgttgacagttatgaagacaatgtttgatggt
cttgatcatgtaagagacacgccggatgaggacgaagaagctgcagaatgggttgaggcc
ttggagattaatgaggacatacaaaatgttgtattttctgatttggatgaagaggaagga
gtacatgaagataatgacaatggaactggatgggaaattgatgagaatctagaccttcct
cctgaggttgaatctcctaaggttaccagtaatgggcgctcttcagtatttgttgcccct
actccaggaatgccagtgagccagatatggacccaaagatcgtcacttgctgctgaatat
gttgcagctggaagctttgacactgctatgcgtttgcttaccaggcaactgggcataaaa
aattttgccccattgaaaccactgtttattgatctgttttctgccagccattcttacttg
cttgcctttgcttctgctcctgtgatttctgtggcactggagagggggtggaatgaatta
tccagtcctaatgtgaggggtcctcctgctcttatatttagtttttctcaattggaggaa
aaacttagagctggttacaaattaacaacttctgggaagttaagtgacgcgctgcggacc
tttaccactattcttcatacaattcctttgatagtggttgaatcaaggagagaggttgat
gaagtgaaggagttaataaccatagtgaaagaatatgttctgggcttgaagatggaattg
aagaggagagagctaaaagacaacccagttcgacagcaggaattagctgcctactttact
cattgtaaccttcagaagcctcatgtgagacttgcattgctcactgctatgacaaattgc
tacaaagcgggaaatctgaacacggctgccaattttgcccgtcgactcttggaaaccaac
cccacggttgagagccaagcaaagaccgcacgacaagtactccaggctgctgagagaagg
atgacagattcaacggaattgaactatgatttcaggaatccgtttgtagtttgtggggct
acttatgtacctatttatcggggtcagaaggatgtctcatgtccttactgcagttcccac
tttgtgcctgatcagaatggccagatttgtgctgtttgtgatcttgcagtcattggggca
gatgcatctggcttactttgctccacagcacagaaaaggtag
DBGET
integrated database retrieval system
