Spinacia oleracea (spinach): 110801487
Help
Entry
110801487 CDS
T05137
Name
(RefSeq) phytochrome B
KO
K12121
phytochrome B
Organism
soe
Spinacia oleracea (spinach)
Pathway
soe04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
110801487
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHY
PAS
PAS_2
GAF
HATPase_c
HisKA
PAS_9
PAS_4
PAS_8
PAS_3
Motif
Other DBs
NCBI-GeneID:
110801487
NCBI-ProteinID:
XP_021862546
UniProt:
A0A9R0J7X9
LinkDB
All DBs
Position
3:13725334..13731956
Genome browser
AA seq
1120 aa
AA seq
DB search
MGSTSRGSQSNNQAHNPSDSMSKAIAQYTVDARLHAAFEQSGESGKSFDYSQSVRPPTIL
SVPEKQITAYLSRIQRGGQIQPFGCMIAIDESSYRVIAFSENAREMLGLNPHTVPSMEVD
RPELLMIGIDVRTLFMSNSVLLLEKAFGAREITLLNPVWIHSKVSGKPFYAILHRIDVGI
VIDLEPARTEDPALSIAGAVQSQKLAVRAISHLQSLPGGDIKILCDTVVESVRQLTGYDR
VMVYKFHEDEHGEVVSESKQPDLEPYLGLHYPATDIPQASRFLFKQNRVRMIVDCHVNPV
SVIQDERLQQPLCLVGSTLRAPHGCHSQYMANMGSIASLVMAVIINGSDDEAAPGGRNAM
RLWGLVVCHHTSPRSIPFPLRYACEFLMQAFGLQLNMELQLATQMLEKRVLRTQTLLCDM
LLRDSPTGIVTQSPSIMDLVKCDGSALLYRGSYYPLGVTPTEAQIKDIVQWLLTYHGDST
GLSTDSLADAGYPGAAALADAVCGMAVAYITQKDFLFWFRSHTAKEIKWGGAKHHPKDKD
DVQRMHPRSSFKAFLEVVKSRSMPWENAEMDAIHSLQLILRDTFKDADVNSKAVVYTDGG
DIEMQGMDELSSVAREMVRLIETATAPIFAVDANGRINGWNAKIAELTGLSVEEAMGKSL
VHDLVFKESEEVVQELLHHALRGEEDKNIEIKLKTFGTELHNKAVYVVVNACSSKDYTNN
IVGVCFVGQDVTGQKVVMDKFINIQRDYKSIIHSPNPLIPPIFASDENAYCTEWNTALEN
LTGWSRGEVMGKMLVGDIFGACCRLKGQDALTKFMIVLHSAIAGQDADKFPFSFYDRNGK
FVQALLTANKRVNMNGDIVGAFCFLQIASPELQQMIKIQRQQEKLCFERMKELAYLSQEI
KNPLNGIRFANSLLESTDLSEDLKQFIETSSSCEKQIQKIVEDINLEIFDDNTLELEKAE
FMLGNVINAVVSQVMMLLRERGLQLIRDIPEEIKTLAICGDQVRIQQVLAEFLVNMVRYA
PSPDGWVEIHVQPRLKHISDGQNVVYIEFRLVSPGEGLPPELVQDMFRNSNWSTKEGIGL
SMCRKILKIMNGEVQYIRESERSYFLIILEFPCRGLKGVD
NT seq
3363 nt
NT seq
+upstream
nt +downstream
nt
atgggttcaacaagtagagggtcacaatccaataaccaagctcacaatccatctgattca
atgagcaaagcaattgcgcaatacactgttgatgctcgtttacatgctgcttttgagcaa
tctggggagtctggtaagtcatttgattactctcaatcagtcagaccacccacaattcta
tctgttcctgaaaaacaaattactgcatatttgtctagaattcaaaggggtggccaaatt
cagccttttgggtgtatgattgccattgatgaatcgagttatagggtaattgcattcagt
gaaaatgctagagaaatgttggggttaaacccacatactgtaccttctatggaggttgat
aggcctgaacttttgatgattggaattgatgtaagaacccttttcatgtcaaatagtgtg
ttgttgttagagaaggcttttggggctagggaaattacacttttgaaccctgtttggatt
cattccaaggtatctgggaagcccttttatgcaattttgcataggattgatgtggggatt
gttattgatcttgaacctgctagaactgaggacccagccttgtcaattgctggggctgtt
cagtctcagaagcttgctgtgagagcaatttcacatttgcagtctttgcctggtggggat
attaagattttgtgtgatactgttgttgagagtgtgaggcagcttactggttatgatagg
gttatggtgtataagtttcatgaggatgaacatggggaggttgtttctgagagtaagcaa
cctgatttagagccgtatctcgggttgcattatcctgctacagatatacctcaggcgtct
aggtttttgtttaagcaaaatcgggttaggatgatagtggattgccatgttaatcctgtg
tccgtgattcaggatgaacgtctacagcagcctctttgcttagttggttccacacttaga
gctcctcatggttgccattctcagtatatggctaatatggggtccattgcttctttagtt
atggcagtgataatcaatggaagtgatgatgaagctgcacctggtggtaggaatgcaatg
agattgtggggtttggttgtatgccatcatacatctccgcggtccattcctttcccgttg
agatatgcttgtgagttcttaatgcaggcttttggcctacaattgaatatggagttacag
ttagcaacacagatgttggaaaagcgtgttttaaggactcaaactctgttatgtgatatg
cttcttcgagattctcccactggaattgttactcaaagcccgagcatcatggatctggtg
aagtgtgatgggtctgcactcttgtaccggggtagttactacccgttaggtgtaacccca
actgaggcccaaataaaggatattgtgcagtggttattgacttaccatggggactctact
ggtctgagcacagacagtttggctgatgcaggttaccctggcgcagcagcacttgctgat
gcagtttgtggtatggctgttgcttatataactcaaaaggatttccttttctggtttagg
tcacacactgctaaagaaatcaagtggggtggtgcaaagcatcatccgaaagacaaagat
gatgtacaaaggatgcatccacgctcttcatttaaagcgtttctggaagttgtcaaaagt
cggagtatgccatgggagaatgcagagatggatgcaattcattcattgcaacttattttg
cgagacacgttcaaggatgcagatgtcaattccaaggcggttgtgtatactgatggtggg
gatatagagatgcaagggatggatgagcttagttcagttgccagagaaatggttaggttg
attgaaactgctacagcaccaatatttgctgttgatgcgaatggccgcattaatgggtgg
aatgcgaagattgctgagttgactggcctctctgtggaggaagccatgggaaaatcttta
gttcatgacctcgtgtttaaagaatctgaagaagttgttcaggagcttcttcatcatgct
ttaagaggtgaagaagataagaacatagagataaagctgaaaacctttggcacagagctg
cataataaagctgtttatgtggttgtcaatgcttgctctagcaaagactatacaaacaat
atagttggagtatgctttgtcggccaagacgttactggtcagaaagttgttatggataaa
ttcatcaatatacagcgggattataagtcgattattcatagcccaaatcctttgattccc
cctattttcgcttcagatgagaatgcttattgcactgagtggaatacagccttagagaac
ctcactggatggagcagaggagaggtcatgggaaagatgttggttggggatatttttggt
gcttgttgccggcttaagggtcaagatgctttgaccaaattcatgatcgttttgcatagt
gccattgcaggacaggatgctgacaaatttccattttctttctacgatcgtaatggaaaa
tttgtgcaagctctcttgactgcaaataagagagtcaacatgaatggtgatattgttgga
gccttttgctttttgcaaatagcaagtcctgaattgcaacaaatgataaaaattcagaga
caacaggaaaaattatgctttgaaaggatgaaagaattggcttacctatctcaagaaata
aagaatcccctaaatggaatacgtttcgctaattcacttttggaatctacggatttgagt
gaagatctgaagcaatttatagagacaagcagttcctgtgaaaaacaaattcagaagatt
gtagaagatatcaatctggaaatcttcgacgataacactttagagcttgagaaggccgag
tttatgttgggaaatgtcataaatgcggttgtcagccaagttatgatgttactacgagaa
agaggcttacagttgatcagggatattccagaagaaatcaaaactctggctatctgcggg
gatcaagttagaattcagcaagttttggcagaatttttggtaaatatggttcgttatgca
ccttctcctgatggctgggtggagattcatgttcaaccaagactgaagcacatatctgat
gggcaaaatgttgtttacattgagttcaggttggtgagccccggagaagggcttcctcca
gaactggttcaggacatgttccgcaacagtaattggtcaacaaaggaaggaattgggctg
agcatgtgcagaaagatcctaaagataatgaatggtgaagttcagtacatcagggagtct
gaaagaagttacttcctcatcatccttgaatttccttgtaggggcctaaagggtgtcgac
tag
DBGET
integrated database retrieval system
