Spinacia oleracea (spinach): 110801779
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Entry
110801779 CDS
T05137
Name
(RefSeq) ruBisCO large subunit-binding protein subunit beta, chloroplastic-like
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
soe
Spinacia oleracea (spinach)
Pathway
soe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110801779
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
soe03019
]
110801779
03110 Chaperones and folding catalysts [BR:
soe03110
]
110801779
03029 Mitochondrial biogenesis [BR:
soe03029
]
110801779
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
soe04147
]
110801779
Enzymes [BR:
soe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
110801779
Messenger RNA biogenesis [BR:
soe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
110801779
Chaperones and folding catalysts [BR:
soe03110
]
Heat shock proteins
HSP60 / Chaperonin
110801779
Mitochondrial biogenesis [BR:
soe03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
110801779
Exosome [BR:
soe04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
110801779
Exosomal proteins of other body fluids (saliva and urine)
110801779
Exosomal proteins of breast cancer cells
110801779
Exosomal proteins of colorectal cancer cells
110801779
Exosomal proteins of bladder cancer cells
110801779
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
AAA_lid_6
Motif
Other DBs
NCBI-GeneID:
110801779
NCBI-ProteinID:
XP_021862888
UniProt:
A0A9R0J7J2
LinkDB
All DBs
Position
4:185832711..185839165
Genome browser
AA seq
608 aa
AA seq
DB search
MASTFVTMSAVGSLTSVGTQIDKKSFISSHKLSSLSCISSTSLRGNQSYVVPRKRYSLRI
NAATKRLHFNKNGAAIRKLQAGVNKLADVVGVTLGPKGRNVVLESKYGSPKIVNDGVTVA
KEIELEDPVENIGARLVREAASKTNDLAGDGTTTSVVLAQGLINEGVKIVLAGANPIQIA
KGIENTAKGLISELKLMSKEVEDKELADVAAVSAGNNYQIGNMVADALSKVGRKGVVTLE
EGASATDSLYVVEGMQFDRGYFSPYFVTDSEKLIVEYENCKILMVDKKITNARELVNVLE
DAIKNNYAILVMAEDIEQEPLATLVVNKLRGSLKIAAMKAPGFGDRRHQYLDDIAVLTGG
TVIRDEVGLSLDQAGKEVLGHAAKIVLTKETATIVGDGSTQEAVAMKISQIKKQIENEDS
AYEKGKLNERVAKLTSGVAVIQVGARTETELKERKLRVEDALCATKAAVEEGIVVGGGCT
LLRLSTKVDAIKATLGNAEQKLGADIVKRALSYPLDLIAKNAGVNGAVVIEKVLSNDDPR
FGYNAATGKYEDLMAAGIIDPAKVVRCCLEHAASVAKTFLTSDAVVTEIPEPELAPAENP
MDNSGFGY
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaactttcgtaaccatgtccgctgtcgggtctttgacatctgttggaacccaa
attgacaagaaaagtttcatctcatcacataaattgtcttctttgagttgcatatcgtcg
acttcattaagagggaatcaaagttatgtagtaccaaggaaaaggtattccttaaggatt
aacgcggcaacaaaacgattgcatttcaataaaaatggtgctgctattaggaaactacag
gcgggtgtgaataagctagcagatgttgttggtgttactctcggtcctaaaggaaggaat
gtagttttagagagcaagtatggctctcctaaaatcgttaatgacggtgtaactgtggcc
aaggagattgaacttgaagatcctgttgaaaacattggtgctaggcttgtaagagaagct
gcatcaaaaactaatgatttagctggtgatgggactactacatcagtagtcttagcgcaa
ggtttgattaacgaaggtgttaagattgtgttagctggggctaatcctatacaaatagcc
aaagggattgaaaatactgcaaaaggtttgatatctgagttgaagttgatgtccaaagag
gttgaagacaaagaacttgcggatgttgctgctgttagtgctggaaacaactatcaaata
ggaaatatggttgccgatgctctaagcaaagtggggcgcaagggtgtagtgactctcgaa
gaaggagcaagtgctacagacagcttatatgttgttgaaggaatgcaatttgaccgtggc
tatttctcaccgtactttgtcactgatagtgagaaattgattgttgagtatgaaaattgt
aagatcctgatggttgacaagaagattacaaatgcaagagagcttgttaatgtcttagaa
gatgcaattaaaaacaactacgcaattttggttatggcggaagatatagagcaagaacct
cttgcaaccctagttgtaaacaaactcagaggatctcttaagattgctgcaatgaaagca
cctggttttggagatcggaggcaccaatatcttgacgatattgctgtccttaccggagga
actgtaatcagagatgaggttggtttgtcattggaccaagctggtaaagaggtgttgggc
catgctgcaaaaattgtgctcaccaaggaaacagctaccattgttggggatggaagtaca
caagaagcagttgctatgaaaatttctcagattaagaagcaaattgagaacgaagactcg
gcttatgaaaaaggcaaactaaatgaaagagttgctaaacttaccagtggtgttgctgtt
attcaggttggagcacgaactgaaactgagcttaaagaaaggaagctgagagtagaggat
gcactttgtgcaacaaaggcagcggtagaggaaggtatagttgtaggtggagggtgcacg
ttactgcgcctatcaactaaagttgatgccataaaggcaactcttggaaatgcagagcaa
aagcttggagcagatattgtcaaaagagcgcttagttatccactggatctgattgccaag
aatgcaggagttaatggagctgttgtaatagaaaaggtgctctctaatgatgacccaaga
tttggatacaatgctgcaacaggaaaatacgaggatctgatggctgctggaatcatcgat
cctgctaaggtggtaaggtgttgcttggagcatgctgcgtctgtagcaaagacgttcctc
acatcagatgccgtagttactgaaatcccagagcctgaacttgcacctgctgaaaacccc
atggacaactctggttttgggtattaa
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