Spinacia oleracea (spinach): 110801954
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Entry
110801954 CDS
T05137
Name
(RefSeq) mRNA-decapping enzyme subunit 2
KO
K12613
mRNA-decapping enzyme subunit 2 [EC:
3.6.1.62
]
Organism
soe
Spinacia oleracea (spinach)
Pathway
soe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110801954
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
soe03019
]
110801954
Enzymes [BR:
soe01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.62 5'-(N7-methylguanosine 5'-triphospho)-[mRNA] hydrolase
110801954
Messenger RNA biogenesis [BR:
soe03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
110801954
mRNA degradation factors
5'-3' decay
Decapping complex
110801954
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP2
NUDIX
NUDIX_4
Motif
Other DBs
NCBI-GeneID:
110801954
NCBI-ProteinID:
XP_021863055
UniProt:
A0A9R0KA66
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All DBs
Position
1:complement(103039397..103050234)
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AA seq
333 aa
AA seq
DB search
MSGLHRSSSAPLKNGLPPQELLDDLCSRFVLNVPKEDQQSFERILFLVEYAHWFYEDNTV
ENNPSLKSFTLKEFTSLMFNSCEVLKPYVPHIDDIFKDFTSYKVRVPVTGAIILDQTYER
CLLVKGWKGTSWSFPRGKKNKDEEDHACAVREVLEETGFDVSELLDKNEYLEVIFGQQRV
RLYIIAGVSTDNTSFAPLTKKEISEIAWHRLDDLQPASDEVISRSVTGLKLYMVTPFLKS
LRTWIAKQAPPVVSKSDSSRRGISVWKAKNSSTGSSSTAMVNIQQPKILPDTRVTETRGT
ETRVAEKGPGKSLRNFGFDTSSILRAMESGFPG
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgtcagggcttcacagatcctcaagcgctccattgaagaacggccttccgcctcaagaa
ctcctcgacgatctctgcagtcgctttgtgttgaacgttcccaaggaagatcaacaatca
tttgagagaatcttgtttctggttgagtatgcacattggttttatgaggataataccgtt
gaaaataatccatcgttgaaatcctttactctcaaggaattcacatctttaatgtttaat
agttgtgaggttttgaaaccatatgttcctcatattgatgatatattcaaggacttcact
tcctacaaggttcgagttcccgtcactggagcaatcattttggaccaaacgtatgaaagg
tgcttattggttaaagggtggaaaggaaccagttggagttttccacgtggaaaaaagaac
aaggatgaggaagatcatgcatgtgccgtcagagaagttttggaggaaacaggatttgat
gtctctgaacttcttgacaaaaatgagtaccttgaggtgatatttgggcagcagcgggtg
cgcctatatataattgctggtgttagtactgacaacacttcctttgctccacttaccaaa
aaggagatcagtgaaatcgcatggcatagactagatgatctccaacccgccagtgatgaa
gtgatatcacgtagtgtcacaggcctgaagctttacatggttactccatttttaaagtcg
ttaaggacatggattgcaaaacaggcacctccagttgtttcaaaatcagattcttctcgc
agaggaattagtgtttggaaggccaaaaatagttctacgggaagcagctcaacagccatg
gttaacatccagcagcctaagattctgcctgatactcgtgtaactgaaactcgtggaact
gaaactcgtgtagctgaaaaagggcctggcaaaagccttagaaactttggttttgatacg
tcgtcaatcttacgagccatggagtcgggatttcctggttaa
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