Spinacia oleracea (spinach): 110802154
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Entry
110802154 CDS
T05137
Name
(RefSeq) cell division cycle protein 48 homolog
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
soe
Spinacia oleracea (spinach)
Pathway
soe04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
110802154
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
soe03019
]
110802154
03009 Ribosome biogenesis [BR:
soe03009
]
110802154
04131 Membrane trafficking [BR:
soe04131
]
110802154
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
soe04147
]
110802154
Messenger RNA biogenesis [BR:
soe03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
110802154
Ribosome biogenesis [BR:
soe03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
110802154
Membrane trafficking [BR:
soe04131
]
SNARE
SNARE associated proteins
Others
110802154
Autophagy
Aggrephagy
Other aggrephagy associated proteins
110802154
Exosome [BR:
soe04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
110802154
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
CDC48_2
AAA_16
AAA_2
AAA_33
AAA_5
AAA_22
AAA_14
TIP49
NPHP3_N
RNA_helicase
Mg_chelatase
AAA_28
nSTAND3
AAA_18
AAA_17
Parvo_NS1
ATPase_2
IstB_IS21
ABC_tran
Viral_helicase1
AAA_7
Vps4_C
NB-ARC
AAA_24
TsaE
AAA_lid_PRS2_C
DUF815
NACHT
Zeta_toxin
Molydop_binding
Zot
Motif
Other DBs
NCBI-GeneID:
110802154
NCBI-ProteinID:
XP_021863278
UniProt:
A0A9R0J8A1
LinkDB
All DBs
Position
5:complement(34354213..34364562)
Genome browser
AA seq
804 aa
AA seq
DB search
MADHAESSDKGAKKDFSTAILERKKAANRLVVDEAVNDDNSVVSMHPDTMEKLQLFRGDT
VLIKGKKRKDTICIALADESCEEPKIRMNKVVRSNLRVRLGDVISVHQCPDVKYGKRVHI
LPIDDTIEGVTGNLFDAYLKPYFLEAYRPVRKGDLFLVRGGMRSVEFKVIETDPSEYCVV
APDTEIFCEGEPIKREEEDRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKP
PKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNA
PSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPAL
RRFGRFDREIDIGVPDEIGRLEVLRIHTKNMKLSDDVDLEKISKETHGYVGADLAALCTE
AALQCIREKMDVIDLEDETIDAEILNSMAVTNEHFHTALGQSNPSALRETVVEVPNVSWE
DIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQA
NFISVKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRGGSTGDAGGAA
DRVLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRYSIF
KAALRKSPIAKDVDIRALAKYTQGFSGADITEICQRACKYAIRENIEKDIERERRRNDNP
EAMEEDVDDEVAEIKASHFEESMKFARRSVSDADIRKYQAFAQTLQQSRGFGTEFRFATT
TSGTTTTDTFAASAGGADEDDLYN
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atggcggatcatgctgaatcttccgataagggcgcgaaaaaagactttagtactgcgatt
cttgagcgtaaaaaggctgcgaatcgattggttgttgatgaagctgtgaacgacgacaat
tcggttgtttctatgcaccctgataccatggaaaagcttcagctctttcgtggtgatact
gttctaataaagggaaagaaacgaaaagacacaatttgcattgcccttgctgatgagtct
tgtgaagaacctaagataaggatgaacaaggttgtgagatctaacttaagggtgcgactt
ggtgatgtaatatctgtacaccaatgtcctgatgtgaaatatgggaagcgtgtccatatt
cttcctattgatgatacaattgagggtgtcactgggaatttgtttgatgcatacctgaaa
ccgtattttctggaagcttaccggccagtgaggaagggagacctgtttctcgtgagaggg
gggatgagaagtgttgaattcaaggttattgagactgatccttctgaatattgcgttgtt
gccccggatactgagattttttgtgagggtgagccaattaaacgagaagaggaggataga
ttagacgaggttggctatgatgatgtgggtggcgtcaggaaacagatggcccaaatcagg
gagctggtagaattgccattgagacatccgcagttgttcaaatctattggtgtcaagcca
ccaaagggaattttgctttatggaccaccaggatcaggaaagactttgatagcccgggct
gtggcaaatgaaactggtgcattcttcttttgtattaatggtccagagatcatgtcaaaa
ttagctggggaaagtgaaagcaacctcaggaaagcttttgaggaagctgagaagaatgct
ccatccataatttttatcgatgaaattgattcaattgctcccaagcgagagaaaacccat
ggtgaggtcgagaggcgtattgtttcccagctcttaacccttatggatgggcttaaatca
cgggcacatgttattgttatgggtgctactaatcgtccaaacagcattgaccctgcactg
agaaggtttggtcgatttgacagagaaattgatattggtgttccagatgaaattgggaga
cttgaggttctacgaattcacactaaaaacatgaagctttctgatgatgttgatttagaa
aaaatttccaaggaaacacatggttatgttggtgccgacttagccgccttgtgtactgaa
gctgcacttcaatgtatcagagagaagatggatgtaattgacctggaagatgagactatt
gatgctgagatccttaattccatggccgttacgaatgaacacttccatactgctcttggg
cagagcaatccatccgctttgcgtgaaacggttgtggaagttcccaatgtctcttgggaa
gacattggtggcctcgaaaatgtcaaaagggagcttcaagagactgttcaatatcctgtg
gagcatcctgagaaatttgagaaatttgggatgtctccttccaagggggttcttttctat
gggcctcctggatgtggaaagactctgctggcaaaggctattgccaacgaatgccaggct
aacttcatcagcgtgaaggggcctgaattgttgactatgtggttcggagagagtgaagct
aatgttcgagagatttttgacaaggcccgcgggtcggcgccgtgtgttctgttctttgat
gagctggattcaattgcaactcagaggggaggtagcacaggtgatgctggtggggctgct
gacagggttttgaaccaacttttgactgaaatggatggcatgtctgctaaaaagacagtt
ttcataattggagcgacaaatagacctgatattattgatccagctcttctgagacctggt
cgtcttgatcaactaatttatattcctcttccagatgaggagtcccgttattcaatattc
aaggctgccttgaggaagtcccctattgccaaagatgttgatattagagcacttgcaaag
tacactcagggcttcagtggggcagatatcactgaaatatgtcagcgggcatgcaaatat
gcaatcagagaaaacattgagaaggacattgaaagagagagaaggagaaatgataaccct
gaggccatggaggaggatgtggacgatgaagttgctgaaatcaaggcttcacattttgag
gaatccatgaaatttgccaggagaagtgtcagtgatgctgatattcgtaaatatcaggcc
ttcgctcagaccttacagcagtctagaggatttgggactgagttccgtttcgccactacc
acttctgggactaccactacagacacatttgctgcctctgctggtggagctgatgaagat
gacctctataactag
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