Spinacia oleracea (spinach): 110802409
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Entry
110802409 CDS
T05137
Name
(RefSeq) probable methionine--tRNA ligase
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
soe
Spinacia oleracea (spinach)
Pathway
soe00450
Selenocompound metabolism
soe00970
Aminoacyl-tRNA biosynthesis
soe01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
110802409
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
110802409
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
soe01007
]
110802409
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
soe03016
]
110802409
Enzymes [BR:
soe01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
110802409
Amino acid related enzymes [BR:
soe01007
]
Aminoacyl-tRNA synthetase
Class I (U)
110802409
Transfer RNA biogenesis [BR:
soe03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
110802409
Prokaryotic type
Other AARSs
110802409
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
tRNA_bind
Anticodon_3
tRNA-synt_1
tRNA-synt_1e
Anticodon_1
CoV_peptidase
CLIP1_ZNF
Motif
Other DBs
NCBI-GeneID:
110802409
NCBI-ProteinID:
XP_021863544
UniProt:
A0A9R0K9L2
LinkDB
All DBs
Position
1:complement(2646695..2657817)
Genome browser
AA seq
801 aa
AA seq
DB search
MADLNNHGVAAAILPIPGKRNVLITSALPYVNNVPHLGNIIGCVLSADVFARYCRLRGYN
TVYICGTDEYGTATETKAMEEKCTPKQICDKYHAIHKEVYEWFNISFDKFGRTSSPEQTE
VCQSVFKKLMENNWLTENTMQQPYCDTCEKFLADRLVEGICPTPGCNYDSARGDQCEKCG
KLLNPTDLKDPKCKACQSTPRIRDTDHLFLELPLLQDKLEEYINKMSEAGSWSQNAIQVT
NGWLKEGLRSRCITRDLKWGVPVPHEKFKDKVFYVWYDAPIGYISITACYTPDWEKWWKN
PEDVELYQFMGKDNVPFHTVMFPSTLLGTGESWTLMKSISVTEYLNYEAGKFSKSKGIGV
FGNDAKDTSIPVEVWRYYLLTNRPEVSDTLFTWADLQAKLNSELLSNLGNYVNRVLSFIA
KPSDQGYGSVIPDAPQAEAHSLTKALAEKVGKHVEQYVEAMEKVKLKQGLKTAMAISSEG
NAYLQESQFWKLYKEDQPACAVVMRTAAGLVYLLACLLEPFMPSFSLEVLKQLNMPRLQV
SLSDENGDLEKIRILWDILPAGHKIGKPEPLFKELKDEEMEFYREKFAGSQADRAVKAAA
EKTAEQLKKTKISDKSEKKKAAKPAGGSKTKSTPEPEVTIARLDIRVGLITKVEKHPDAD
SLYVEEIDVGEAAPRTVVSGLVKYIPIEEMQNRKVCVLCNLKPASMRGIKSHAMVLAASN
SEHTKVELVEPPKDASIGERVKFSGFDGEPDDVLNPKKKVWETLQVDLSTDSNLVARFKD
LPFTTSAGICKVSSIANGTIK
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atggcggatctcaacaaccatggcgtcgccgccgccattcttccgattccagggaagcgt
aacgttcttattacaagtgctcttccttacgtcaacaacgttcctcacctcggcaacatc
atcggctgtgtattgagtgcggatgttttcgcacggtattgtcggcttcgaggttataac
actgtatacatttgcgggactgatgagtatggtactgccactgaaactaaagcgatggag
gagaaatgcactcctaaacagatttgtgacaaataccatgcaattcataaggaagtctac
gaatggttcaacataagttttgataaatttggacgcacgtcaagccccgaacagactgaa
gtttgtcaatctgtttttaagaagctgatggagaacaattggcttacagagaacacaatg
caacagccttattgtgatacttgtgaaaagttcttagctgatcgccttgttgagggtatt
tgcccaacacctggctgcaattatgattctgcccgaggtgatcagtgtgaaaaatgtgga
aaacttttgaatcctacagacctgaaagatcctaaatgcaaagcatgccaatctactccg
cgcattcgtgacacagatcacttgtttcttgaacttccactgctccaagacaagttggaa
gaatacataaataagatgtcagaagctggatcttggagccagaacgctattcaagtaaca
aatggatggctgaaagaaggacttagatcacggtgtattactagagatttgaaatggggg
gtccctgtcccgcacgaaaagtttaaagacaaggtattttatgtttggtatgatgcacct
atagggtatatttcaatcacagcatgctacacgccagattgggagaagtggtggaaaaac
cctgaagatgttgagctatatcagtttatgggcaaggataatgtgccattccatactgtg
atgtttccatcaacacttcttggtactggtgaaagctggactttgatgaagagtatcagt
gtcacagagtatctgaactatgaagcaggcaaattctccaaaagcaaaggcattggagta
tttgggaatgacgccaaggacacaagtattcctgtagaagtctggagatactacttgcta
actaaccggcctgaggtgtcagacacattgtttacttgggcagatttacaagcaaaacta
aacagtgagctgctgagcaatctggggaactatgtaaatcgggtcttgagctttattgct
aagccatcagatcagggatatggttctgtcattcctgacgctccacaggcagaagcacat
tctttaactaaggcattagcagaaaaagtaggaaagcatgtagagcaatatgtagaagct
atggaaaaggttaagctaaagcaaggacttaaaaccgcaatggccatttcgagtgaagga
aatgcttatttacaggaaagtcaattttggaagctttataaagaggatcagcctgcatgt
gctgtggtcatgagaactgccgcaggactagtgtatctcttggcctgtttattagagcct
tttatgccatctttttctctcgaggtactaaaacaacttaatatgcctcgacttcaagta
tctctttcggatgaaaatggggatcttgagaaaatcaggatactctgggatattttacct
gctggtcacaaaatagggaaaccggaaccattattcaaggaactgaaagacgaagaaatg
gaattttatcgggagaagtttgctggaagtcaagctgacagggctgttaaagctgctgcg
gaaaagactgctgagcagttgaagaaaacaaagatatcagataaaagtgagaagaaaaag
gctgcaaagcctgctggtggatccaaaactaagtcgacccctgaaccagaagtaacgatt
gctagacttgatattcgagttggccttataacaaaagttgagaagcatcctgatgcagat
tccctttacgtggaagagatcgatgttggtgaagcagcacctagaactgttgtcagtggt
cttgtcaagtacatacctattgaggaaatgcagaaccgaaaggtatgtgtactttgcaac
ttgaaaccagctagcatgagagggatcaagtctcatgccatggttcttgcggcttccaac
agcgagcacaccaaggtagaattagttgagcccccaaaagatgcttccattggggagagg
gtcaagttttcaggttttgatggtgagccagatgatgttttaaacccaaagaagaaagtg
tgggagacattgcaagtggatctaagcacagactctaatttggtggcccggttcaaagat
ttgccattcaccacatcagctggtatctgcaaggtttcgtcaattgcgaatggaaccata
aagtag
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