Spinacia oleracea (spinach): 110802958
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Entry
110802958 CDS
T05137
Name
(RefSeq) uncharacterized protein LOC110802958
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
soe
Spinacia oleracea (spinach)
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
110802958
Enzymes [BR:
soe01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
110802958
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
Endotoxin_C
EMC7_beta-sandw
Gti1_Pac2
Motif
Other DBs
NCBI-GeneID:
110802958
NCBI-ProteinID:
XP_056690895
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Position
1:130482876..130491820
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AA seq
717 aa
AA seq
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MEVGKNMIIFFMVLLMVLGSSDARRYPGRHTKTHDNKGSKEHHHHHDNKGSKEHHHHDNK
GSNEHHHHDDKGSKEHHNHDDKGSNEHKSVTLSVVDNQYAIMDNGIVQVTFSIPGGHVVG
VEYGGMKNVLDSSHKVSNRGYWDIFWTTKDTEGEEWLSMEKFEVIRNDGDQLELSFSTQW
NGDKNLIPVNLDKRFVMLRGSSGFYNYLVIDHDGSFPATTLSQIRVAYRLRKDKFHYMVI
SDDIQKIMPREEDFARGRPLAYKEAVLWTNTSDPTSKTAVEDKYMYSQDMKDQQVHGWIS
SDKSPIGFWLIKASTEFYSAGPFKQELTSHVGPVSLVDFFSSHYAGKKLVLSVEDGEAWQ
KVIGPCFVYLNKASNSQDPYGQLWNNAKDQLQKENDKWPYNFPSSKFYFKANQRGSVQGQ
LFIRDRYINNNLIHASSAWVGLAAPGEEGSWQTETKGYQFWVKADNDGKFIIKGVLEGEY
NLYAWVSGFLGEFRHDTNIIVRQGERISLNEIVFEPPRNGPTLWEIGIPDRTAAEFFVPD
PKPGYTNPALLNNDKNKYRQYGLWERYTDLYPNNDLVYTVGTSDYTKEWFYAHVPRGTND
RELQPTTWQVRFPLQNVNPFRRYTLRIALASTNNAQLHIRFNRDPSSRPQFTTGRRMGFD
NAIPRHGIHGLYSQFSFDVPGSFLRNGMNTLDLTQPICSSFWSGVMYDYLRLEGPIF
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atggaggttggaaagaatatgataatttttttcatggttcttttaatggtgcttggaagt
tctgatgcaagaagatatcctggaagacatacaaaaactcatgacaataaaggatcaaaa
gaacatcatcaccatcatgataacaaaggatccaaagaacatcaccatcatgacaataaa
ggatcaaatgagcatcaccatcatgatgataaaggatcaaaagagcatcacaatcacgac
gataaaggatcaaacgaacataaatctgttactttgagcgtcgtcgataatcaatatgct
attatggataatggaatcgtccaagttacattttcaattccaggaggtcatgtggttgga
gttgagtatggtgggatgaaaaatgtgcttgactcctctcacaaagtgagcaatagaggg
tactgggatatattttggacgacaaaagataccgaaggagaggagtggttaagtatggaa
aagttcgaagtgatcaggaatgatggggaccaattagagctttctttttcaacacaatgg
aatggagataaaaatttaattccagttaatttagataaaaggtttgtaatgcttcggggt
tcatccggattttacaattatcttgtaattgatcatgatggaagttttcctgcaaccact
ctttctcagataagagtagcgtatagacttcgaaaggacaagttccattatatggttatt
tcggatgatattcaaaagatcatgccaagagaggaagattttgcgagaggtcgtccactc
gcgtataaagaagcggttctatggacaaatacttccgatccaacgtcaaaaaccgcggtt
gaggacaaatacatgtactcacaagacatgaaagatcaacaagtacatggatggatatct
tcagataaatccccaattggattttggctaataaaagcaagtacggagttttattcagct
ggtccctttaaacaggagcttacttctcatgttggaccagtgagccttgttgactttttt
agttcgcattatgccggtaaaaagttggtactatcagttgaggatggagaagcttggcag
aaggttattggtccttgttttgtttacttgaacaaagcatctaattctcaagatccttat
ggacaactttggaacaatgcaaaagatcagttgcaaaaagagaatgacaagtggccttat
aattttccgtcgtctaagttttatttcaaagctaatcaacgaggatccgttcaaggccaa
ttattcatccgagataggtacataaataataatttgattcatgcaagttcggcttgggtc
ggattggccgcacccggtgaggaaggttcatggcaaacggagactaagggatatcaattt
tgggttaaggcggataatgacggaaaatttattatcaaaggcgttctcgaaggagaatat
aatctctatgcatgggtctccggattcttaggcgagtttagacatgatacaaacatcata
gttcgccaaggcgaacgaataagtttgaatgagattgtgtttgaaccaccacgaaatgga
cctactctttgggaaatcggaattcctgatcgtactgcagctgagttttttgtacctgac
ccaaaaccaggatatacaaatcccgccctccttaataacgacaaaaacaagtatagacaa
tatggtttgtgggagagatacaccgatctttatcctaacaatgatctcgtctacacggtc
ggtacaagtgattatacaaaggagtggttctatgctcatgttccaaggggaacgaatgat
agggaattacaaccaacaacatggcaagtccgattcccactccaaaatgtgaatccattt
cgaagatatacattgagaatagcattagcttctacaaataatgctcaactacatattcgg
ttcaatagagatccttcgtctagaccacaatttacgacgggaagaaggatgggatttgat
aatgcaattccaagacatggaattcatggcttgtactctcaattcagttttgatgtgccc
ggctcgtttcttcgtaatggaatgaacactcttgatctcacacaaccaatatgtagtagt
ttttggagtggtgttatgtatgattatttacgtttagaaggtcctattttttag
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