Spinacia oleracea (spinach): 110803053
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Entry
110803053 CDS
T05137
Name
(RefSeq) protein DAMAGED DNA-BINDING 2
KO
K10140
DNA damage-binding protein 2
Organism
soe
Spinacia oleracea (spinach)
Pathway
soe03420
Nucleotide excision repair
soe04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
110803053
09124 Replication and repair
03420 Nucleotide excision repair
110803053
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
soe04121
]
110803053
03400 DNA repair and recombination proteins [BR:
soe03400
]
110803053
Ubiquitin system [BR:
soe04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul4 complex
Target recognizing subunit (DCAF)
110803053
DNA repair and recombination proteins [BR:
soe03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
110803053
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
PQQ_3
YL1
Motif
Other DBs
NCBI-GeneID:
110803053
NCBI-ProteinID:
XP_021864208
UniProt:
A0A9R0JA08
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Position
1:128112162..128116405
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AA seq
543 aa
AA seq
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MSPRTRRGASPKFVIERDEDSEESSSDEDEENGVGDCEDDEVEEEEEIEETKRREKKPIT
ISLKKVCKVCKKTGHQAGFQGATYIDCPMKPCFLCKLPGHTTMNCPHRVATEHGVIPAPR
KSTRHSVDYIFERQLRPHVPAIKPGFLIPDEVTRAVIRYHSRRVTCLEFHPTNNNILLSG
DKKGQLGVWDYDKVYEKRVYTNIHSCLLNTMRFNSVNDGTIYGASSDGTISCTDLETGIS
ESMMNLNPNGWSSPKSWRMLYGLDINSEKGLVLVADNFGYLYMLDTRTKAKVREGVLIHK
KGSKVVGLQCNPVQPDLLLSCGNDHFARLWDLRRLEAGSSLGNLAHRRVVNSAYFSPHTG
SKILTTAQDNRIRVWDSIYVNMESPSREIVHSHDFNRHLTPFRAEWDPKDSSESLVVIGR
YISENYNGVALHPIDFIDVTTGQLVAEVIDPNITTISPVNKLHPRDDVLATGSSRSLFIW
RPKDKSEDVQQKEEKKTIIYYGKADSKQKKKLGDESDESDDESFKSKGKKSQTKSSAIKK
VKR
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgtccccgagaacaaggagaggagcgtcgccgaagttcgtcatagagagagacgaagat
tccgaagaaagctcctctgacgaagacgaagaaaatggcgtcggtgattgtgaagacgat
gaagttgaagaagaagaagaaattgaagagaccaagaggagagagaaaaaacctattaca
atttctctcaaaaaagtttgcaaagtatgcaagaagacaggacatcaagcggggtttcaa
ggagctacttatattgattgcccaatgaaaccttgtttcctttgcaaattgccagggcat
acaacaatgaattgccctcatcgtgtagctactgagcatggtgtgattccagcacctcgt
aagagtactcgtcattcagtggactacatatttgaacgccagcttaggccacatgttcct
gctatcaagcctggatttctaatcccggatgaagtgacacgagcagttatcagataccat
agtagacgagttacatgcttggaattccatccgaccaacaacaatattcttttatctggg
gacaagaaaggtcaacttggagtctgggattacgataaagtttacgaaaaaagagtttat
acaaatattcactcctgcttgctcaacactatgagatttaattcagttaatgatggaact
atttatggtgcatcctctgatggcaccattagctgcaccgacttagaaactggaatctcg
gagtcgatgatgaacctcaatcctaatggctggagtagtccaaagagttggaggatgctg
tatggcttagatattaactcagagaaggggcttgttttagttgctgataattttggttat
ctgtacatgttggatacacgtaccaaggctaaagtaagggagggtgtcttgattcataag
aagggtagcaaggttgttgggttgcaatgtaaccctgtccagccagatcttctcttgagt
tgtggaaatgatcactttgctcgtttatgggatctccgccgattagaagctggatcttct
cttggcaatcttgcacatcgccgagtagtaaattctgcatatttctctccgcatacaggg
agcaaaatcctcactacagcacaagacaatcgaattcgtgtatgggattcaatatacgtc
aacatggagtcaccaagccgtgaaattgtacatagccacgattttaatcgccatttgact
ccttttcgagctgaatgggatcccaaggattcgtcagagtctctagttgttattggacgt
tacatcagcgagaactacaatggcgttgctctgcatcctattgactttatagatgtgacc
acagggcaattagttgctgaggtgattgacccgaatatcacaaccatcagtcctgtaaat
aaactgcatcccagagatgatgttctggcaactggtagttcaagatctctatttatatgg
agacctaaggataaatccgaggacgtgcaacagaaggaagaaaagaaaacgattatttac
tacggaaaggctgacagtaaacagaaaaagaagcttggtgatgaaagtgatgaatcggat
gatgaatcattcaagtctaaaggcaagaaatcacagacaaagtcatctgccataaaaaag
gtaaagaggtga
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