Spinacia oleracea (spinach): 110803078
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Entry
110803078 CDS
T05137
Name
(RefSeq) nuclear pore complex protein NUP107 isoform X1
KO
K14301
nuclear pore complex protein Nup107
Organism
soe
Spinacia oleracea (spinach)
Pathway
soe03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110803078
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
soe03019
]
110803078
03036 Chromosome and associated proteins [BR:
soe03036
]
110803078
Messenger RNA biogenesis [BR:
soe03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
110803078
Chromosome and associated proteins [BR:
soe03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
110803078
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup84_Nup100
DUF1186
DUF1570
Motif
Other DBs
NCBI-GeneID:
110803078
NCBI-ProteinID:
XP_056684814
LinkDB
All DBs
Position
1:131282465..131300576
Genome browser
AA seq
1095 aa
AA seq
DB search
MDVDMDTSPSYFDPHDLSIREQFRRYGKRPSTSPLQDSPASNYGEGRMSNTALFLENIKQ
EVESLDYREGTPSRTHSAYKRRSPDSQIIPEFRSAIDSSHRAGSHSLKACKIEEDVLDSG
ETTFSLFASLLDSSSRGLISIPDLILQFEKSCRDVSETIRYGSTERHRIVEDRLMRQKAQ
LLLDEAASWSLLWYLYGKGSEEIPEDVVLYPTTSHLEACQFVVSDLTAQLCLRVVQWLED
LASKALELENKVRGSHVGTYLPSSGIWHNTQRHLKKNEKSPKTVKHLDFDAPTRENALPL
PDDRKQDESLLEDVWILLRAGRVEEACDLCRSAGQPWRAASLCPFGGSDLVPSVEALSKN
GKNRILQAIELESGIGRQWRLWKWACYSASERIADQGGGKYETAVYAAQCSNLKRMFPVC
MDWESACWAMAKSWLDVQMDMELARLQPGRMELLKNYEEANGSSPSQRVSSSGSSGGLEN
WPLQVLNQQPRHLSSLIQKLHSSDMVHEAVTRGCKEQHRQIEMNLMSGDIPHLLDLVWSW
ISPSDDDQNAFRPHGDPHMIRFGAHLVLVLRFLLGDEVKDVFKEKIMNVGDLILHIYAMY
LFSQQHEELVGIYASHLARHRCIDLSVHMMELRLNARVHIKYKLFVSAMEYLPFSPGDES
RGSFEEIIESVLSRSREIKVSKYDNSADVAEQHRLQSLDKAMTVQWLCFTPPSTVDDVET
VGSRLLLRALMHSNILFREFALISMWRVPAMPIGAHKLLSFLAEPLKQPTENLLAFEDHD
VSDYLKEFSDWSEYYSCDATYRNWLQYELENAEVSPSKLSVEEKQKVIVAAQEALNSSLL
LLLRKENPWLVPGENQIYDTTEPVVLELHATAILCLPSGECMCPDATLCATLMSALYSSV
TEEVVLNRQLTVDVKVSFRNNFCVEVILRCLAVEGDGLGPHELNDGGILASVMAAGFKGE
LSRFQAGVTMEISRLDAWYSNAEGSVKDQAAYIVRGLCRRCCLPELILRCMQMSVSLVEL
IEVPERHEELIELVACPETGFIRLFSQQQLQEFLLFEREYSICAMELQEERSMSAHEQLY
QSQVRIPPPTCVIGQ
NT seq
3288 nt
NT seq
+upstream
nt +downstream
nt
atggacgttgatatggacacttctccgagctactttgatcctcatgacctcagcatcagg
gagcaatttcgtcgttatgggaagaggccaagcacttctccacttcaagatagtccagcc
tccaactatggtgaaggaaggatgtctaatactgcattgttccttgaaaacatcaaacaa
gaggttgagagtttggattatcgagaaggaacgccttccaggacacattctgcttacaaa
agaagatcccctgatagtcagataataccagaatttcgcagtgccattgattcatctcac
cgggcaggaagccattcgttaaaagcatgcaagatcgaggaggatgtgctggattctggc
gaaacaacattttctttattcgcttctcttttagattcttccagccgagggcttatatca
attcctgacctaattcttcagtttgaaaaatcatgccgtgatgtttctgaaactataagg
tatggctctactgagaggcatcggattgtagaagacagattaatgcgacaaaaagctcag
ctcttgcttgacgaagctgcttcctggtcacttctttggtatctctatggaaaaggaagc
gaagaaattcctgaagatgttgttctgtatccaacaacttcacatctggaagcttgccaa
tttgttgtgtcagatctcactgcacaattgtgccttcgagttgttcagtggctggaggac
ctagcatccaaagcccttgaattggaaaacaaggttcgtggatcacatgttggtacgtat
cttcctagctcaggcatttggcataatactcaacgacatcttaagaagaatgaaaaaagt
ccgaagactgtaaagcacttggattttgatgctccaacgcgagaaaatgcactgccattg
cctgatgacagaaaacaagatgagtctcttctagaagatgtttggattcttctacgtgcc
gggcgagtagaagaagcatgtgacctctgcaggtctgctggacagccatggagggctgca
agtttatgtccgtttggagggtcagacttagtcccatccgttgaagcgctatcaaagaat
ggtaaaaacagaatccttcaagctatcgaactggaaagtggaattggtcgccaatggcgc
ctttggaagtgggcatgttactctgcctcagagaggattgctgaccagggtggtggaaaa
tatgaaacagcggtttatgcagctcagtgtagcaacttaaagcgaatgtttccagtttgc
atggattgggagtcagcatgttgggcaatggccaagtcatggcttgatgtccagatggac
atggaattggcccgtttgcagcctggaagaatggaactcttgaagaattatgaagaggct
aatggttcaagtcctagtcaaagagttagcagttctggatcttcgggggggctagaaaat
tggcctttacaagttctgaaccagcaaccacgacacctttcttctcttattcaaaagctt
cattccagtgacatggtacatgaagctgttactcgtggatgcaaggagcagcaccgacag
attgagatgaatcttatgtctggagatataccacatctattggaccttgtttggtcatgg
atatcaccttcggatgatgatcaaaatgccttcaggcctcatggagatccccatatgatt
cgttttggagctcatttagtattggtgcttagatttttgcttggagatgaagtgaaggat
gttttcaaggagaaaataatgaatgttggtgatctcatccttcatatctatgcaatgtat
ctattttcgcaacaacatgaggagttggttggaatatatgcttcacacctagcacgtcat
cgttgcattgacctctctgtgcacatgatggagctacgattgaatgctagagtacacatt
aagtacaaattatttgtatctgctatggagtatttgccgttttctcctggagatgaatca
agaggcagctttgaagaaattattgagagtgtattgtcaagatctcgcgaaatcaaagtt
agcaagtatgataactcagcagatgttgcagagcaacatcggttgcaatcacttgataaa
gctatgactgtacagtggctttgctttacacccccatcaacagttgatgatgttgaaact
gttggttccaggcttcttctacgagcacttatgcacagtaacatactcttccgagaattt
gctttaatatccatgtggagggtgccagcaatgcccataggtgctcataaactgcttagt
tttcttgctgaacccttgaagcaacccactgaaaatcttctagcttttgaggatcatgat
gtttccgactacctgaaggagttcagtgattggagtgagtactactcctgtgatgcaaca
taccgcaactggcttcaatatgaactagagaatgcggaggtttctcccagtaagctatct
gtggaagaaaaacagaaagtcattgtagcggcacaagaggcactcaactcttcactgtta
ctcctactgaggaaggaaaatccttggttggttccaggtgaaaatcaaatttatgacaca
acagaacctgtggtccttgaattgcacgctacagcgatattgtgtttgccttctggtgaa
tgcatgtgtccggatgccaccttatgtgccacattgatgagtgccctctactcttcggtg
acggaggaagttgtgttaaatcgacaattgacggtcgatgtgaaggtttcttttaggaat
aatttctgtgttgaggttatccttcgctgcttggcagttgaaggcgatggattagggcct
catgaactgaatgatggtggtatccttgccagtgtaatggcagcgggctttaaaggtgaa
ctttctcgatttcaagctggtgtcacaatggagatttcacgactggatgcttggtattct
aatgctgaaggctccgtgaaagatcaagctgcatacattgtgcgtggtctctgtcgcagg
tgttgtcttccagaactgattttacgctgcatgcagatgtctgtttcattggtggagttg
attgaggttcctgagaggcatgaagagttgattgagcttgttgcttgtccggaaacagga
tttattcgtttattcagtcaacagcaactgcaggaatttttgctgtttgagagagagtat
tcaatatgcgcaatggagcttcaggaagaacgctctatgagcgcccatgaacagctgtac
cagtcacaggttcgaatccctccaccgacatgtgtcatagggcagtaa
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