Spinacia oleracea (spinach): 110803298
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Entry
110803298 CDS
T05137
Name
(RefSeq) cell division control protein 48 homolog E
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
soe
Spinacia oleracea (spinach)
Pathway
soe04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
110803298
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
soe03019
]
110803298
03009 Ribosome biogenesis [BR:
soe03009
]
110803298
04131 Membrane trafficking [BR:
soe04131
]
110803298
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
soe04147
]
110803298
Messenger RNA biogenesis [BR:
soe03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
110803298
Ribosome biogenesis [BR:
soe03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
110803298
Membrane trafficking [BR:
soe04131
]
SNARE
SNARE associated proteins
Others
110803298
Autophagy
Aggrephagy
Other aggrephagy associated proteins
110803298
Exosome [BR:
soe04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
110803298
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_2
AAA_5
AAA_22
AAA_33
AAA_14
TIP49
NPHP3_N
RNA_helicase
nSTAND3
AAA_17
Mg_chelatase
AAA_28
ATPase_2
Parvo_NS1
AAA_18
IstB_IS21
ABC_tran
Viral_helicase1
AAA_lid_PRS2_C
AAA_7
Vps4_C
NB-ARC
AAA_24
NACHT
TsaE
DUF815
Zeta_toxin
Zot
Molydop_binding
Motif
Other DBs
NCBI-GeneID:
110803298
NCBI-ProteinID:
XP_021864495
UniProt:
A0A9R0KBJ2
LinkDB
All DBs
Position
3:44493397..44502301
Genome browser
AA seq
803 aa
AA seq
DB search
MADNPESSDKGTKRDFSTAILERKKSPNRLVVDEAVNDDNAVVAMHPDTMEKLQLFRGDT
ILIKGKKRKDTICIALADETCEEPKIRMNKVVRSNLRVRLGDVVSVHQCPDVKYGKRVHI
LPVDDTIEGVTGNLFDAFLKPYFLEAYRPVRKGDLFLVRGGMRSVEFKVIETDPPEYCVV
APDTEIFCEGEPVKREDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKP
PKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNA
PSIIFIDEIDSIAPKREKTNGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPAL
RRFGRFDREIDIGVPDEVGRLEILRIHTKNMKLSDDVDLEKICKDTHGYVGADLAALCTE
AALQCIREKMDVIDLEDETIDAEILNSMAVSNEHFHTALGQSNPSALRETVVEVPNVSWE
DIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQA
NFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRGSSQGDAGGAA
DRVLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRYSIF
KAALRKSPIAKDVDIRALAKYTQGFSGADITEICQRACKYAIRENIEKDIEKEKRRSENP
EAMEEDEEEVAEIKAAHFEESMKFARRSVSDADIRKYQAFAQTLQQSRGFGTEFRFSNTS
SGTTATDAFAAPAAVADEDDLYN
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atggctgataatcctgaatcctccgataagggaacaaaaagagacttcagtactgcgatt
ctggagcgcaagaaatcgccgaatcggttggttgttgatgaagccgtcaatgatgacaat
gcagttgttgctatgcatcctgataccatggaaaaacttcagctctttcgcggcgatact
attctgatcaagggaaaaaaaaggaaagacacaatctgcattgcccttgctgatgagaca
tgtgaagaaccaaaaattaggatgaacaaggttgtgcgatctaatttgagagtgcgactt
ggtgatgtggtttctgtacaccaatgtcctgatgtgaaatatgggaagcgtgtccatatt
cttcctgttgatgataccattgagggtgttactggcaatctgtttgatgcattccttaag
ccttattttcttgaagcctaccgaccagtgaggaaaggagacctttttcttgtgagaggt
ggaatgagaagtgttgaatttaaggttatagagactgaccctcctgaatactgtgtggtt
gccccggatactgagatattttgtgagggtgagccagttaaacgagaagatgagaataga
ttagatgaggttggctatgatgatgtcggtggcgttaggaaacagatggcccagattagg
gagctggtagagctgccattgagacacccacagttgttcaaatctattggcgtcaagcca
cctaagggaattttgctctatggacctcctgggtctggaaagacgttgatagcccgagct
gtggcgaatgaaaccggtgcattcttcttttgtattaatgggccagaaatcatgtcaaaa
ttggctggggaaagtgaaagcaatctcaggaaagcttttgaggaagcagagaagaatgct
ccatccatcattttcattgatgaaattgattcaattgctcccaagcgagagaaaaccaat
ggagaggttgagaggcgtattgtttcccagctcttgacccttatggatgggcttaaatca
cgggcccatgttattgttatgggtgctactaatcgtccaaacagcatagaccctgcattg
agaagatttggtcgatttgacagagaaatagatattggtgttccagatgaagttgggaga
cttgagattctccgcattcacactaaaaacatgaagctttctgatgacgttgatttggaa
aaaatttgcaaggacacacatggctatgttggtgctgacctagctgccttatgtactgaa
gctgcacttcaatgtatcagagagaagatggacgtaattgatctggaagatgaaactatt
gatgctgagatccttaattcaatggctgtttcgaacgaacacttccatactgctcttggg
cagagcaatccatcggccctgcgtgaaacggttgtggaagttcccaatgtctcgtgggag
gacattggtggccttgaaaatgtcaaaagggaacttcaagagactgttcaatatccggtg
gagcatcctgaaaaattcgagaaatttggtatgtctccttccaagggagttcttttctat
gggcctcctggatgtggaaagactttgctggcaaaggccattgctaatgagtgtcaagct
aacttcatcagtataaaaggacctgaattgctaacaatgtggtttggagagagtgaggct
aatgttcgggagatttttgacaaggcccgtgggtcagctccctgtgttctattctttgat
gagcttgattcaattgcaactcagaggggaagcagtcaaggtgatgcaggtggcgctgct
gacagggttttgaaccaacttttgaccgaaatggatggaatgtcagccaagaagactgtt
ttcatcattggagccacaaatagacctgatattatcgacccagctcttttaagaccaggt
cgtctggatcaactcatttatattcctcttccagatgaggagtcccgttattctatattt
aaggctgccttaaggaagtcaccgattgccaaagatgttgatattagagcacttgccaaa
tacacccagggcttcagcggggcagatatcactgaaatatgccaacgggcttgcaaatac
gcaatcagagaaaatatcgagaaggacattgaaaaggagaaaaggagaagcgagaaccct
gaggccatggaggaggatgaggaagaggttgctgaaatcaaggctgctcattttgaggaa
tcaatgaaatttgcccgcagaagtgtcagtgacgctgatattcgtaagtatcaagctttt
gcgcagaccttgcagcaatcaagaggatttggcactgagttccggttctccaacacctct
tctgggactaccgctacagatgcttttgccgcccctgctgctgtagctgatgaagatgat
ctttataattag
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