Spinacia oleracea (spinach): 110803448
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Entry
110803448 CDS
T05137
Name
(RefSeq) cleavage stimulating factor 64-like isoform X1
KO
K14407
cleavage stimulation factor subunit 2
Organism
soe
Spinacia oleracea (spinach)
Pathway
soe03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110803448
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
soe03019
]
110803448
Messenger RNA biogenesis [BR:
soe03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
110803448
U7-dependent histone pre-mRNA processing factors
110803448
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
CSTF2_hinge
CSTF_C
RRM_7
partial_CstF
Motif
Other DBs
NCBI-GeneID:
110803448
NCBI-ProteinID:
XP_021864646
UniProt:
A0A9R0JBU9
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Position
2:complement(4478683..4491133)
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AA seq
528 aa
AA seq
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MASTQQHRCVFVGNIPYDATEEQLIQICEEVGPVVSFRLVIDRDTGKPKGYGFCEYKDEE
TSLSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGLATNVDAQKQVGSPATLV
DASFHQPIGLPIAMTASSVMAGALGGSQTGKVNQNGFQNQSLIGNDPLTHHLANMSRSQL
NQVIHEIKMLSMQNKDLARQLLLVSPQLPKALFQAQIILGMVTPQMLQMPNLRQQTPNPA
VPTPRPSMQHTLQGHRPPVQSLTGLPSFTPLSSVSQNPLAHNQFSAPLPLHPQLRPQQPN
LNQMVAPSQSTVPAHSGLSSHLSTRPQPLSGLHMPPVSSSSFRPVQAPPLQHPGHAGIKT
TQNVNLQPTFQSHSDPGYKVASSVRPASVEAIKKDTPVRAKTARDTTLASRTNTLKNLAS
VASVSDHKDSQDQMVRPSKVMKLDNERGTPFSSAGLATPSATAVASSSGAAGQSSSLEAQ
NIEKQAPQFPPDVDPALLQQVLNLTPEQLSSLPPQQQLQVIQLQQMLR
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atggcctctactcagcaacatcgttgcgtcttcgttgggaatataccttatgatgcaact
gaagaacagctgattcaaatttgtgaagaggtcggtcccgttgtttctttcagactggtt
atagatcgtgacactgggaagccaaaaggttatggattttgtgagtataaggatgaagaa
acatcactcagtgctcgccgtaatcttcagggttatgagattaatggtcggcagttgaga
gtagattttgctgaaaatgacaaaggcgctgatagaaatcgtgaacagggtaggggtgga
ccaggactggctacaaatgttgatgctcagaagcaggtaggaagcccagctacccttgtg
gatgcatcatttcatcagccaattggcctaccaatagctatgactgcttcttctgttatg
gcaggagctcttggtggttctcagactggtaaggtaaatcaaaacggttttcagaatcag
tcacttattggcaatgaccctttaacgcatcatctggccaacatgtccaggagtcaactg
aatcaagttatacatgaaattaagatgctttctatgcaaaacaaggaccttgcacgtcaa
cttttgcttgtgagcccacagcttccaaaagctctcttccaggcacaaataatattgggg
atggtgacaccacaaatgttgcagatgccaaatctaaggcaacagaccccaaatccagct
gttccaacaccacgtccttcaatgcaacataccctacagggacaccgtccacctgttcag
tctcttaccgggttgccctctttcactccattatcctctgtgtcccagaatcctttggca
cacaaccagttctcagcaccattgccacttcatccgcaactgcgacctcagcaaccaaat
cttaaccagatggtcgcaccatcacaaagtacagttcctgcgcattctgggctttcatca
catctctctacacgtccacaacctctaagtggactgcatatgccacctgtatcttcctct
tcatttaggcctgttcaagctccaccattgcaacatccaggacatgctggtattaaaacc
actcaaaatgtaaaccttcagcctacctttcaaagccactcagatcccggatataaggtt
gcctcttcagtacgcccggcttcggtggaggctattaaaaaggacactcccgtacgtgca
aaaactgccagggacacaactttggcaagtcggacaaacaccttaaagaacttggcgtca
gtagcttcggtatctgatcataaagattctcaagatcagatggttcgcccttcaaaagtt
atgaagttggataatgaaagaggtactcctttctcatctgctggattagctacaccaagc
gccactgccgttgcaagtagctctggtgcagctggtcaaagctctagcctagaagcgcag
aatatagagaaacaagccccacagtttccacctgatgtagatcctgctttgttgcaacaa
gtactcaaccttactcctgaacaactgagttcactaccccctcaacagcaactacaagtc
attcaactacagcagatgctcagatga
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