KEGG   Spinacia oleracea (spinach): 110804201
Entry
110804201         CDS       T05137                                 
Name
(RefSeq) protein ROOT INITIATION DEFECTIVE 3
  KO
K14829  pre-rRNA-processing protein IPI3
Organism
soe  Spinacia oleracea (spinach)
Brite
KEGG Orthology (KO) [BR:soe00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:soe03009]
    110804201
Ribosome biogenesis [BR:soe03009]
 Eukaryotic type
  Pre-60S particles
   5-FMC complex
    110804201
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 NBCH_WD40 Beta-prop_TEP1_C EIF3I WDR55 Beta-prop_EML Beta-prop_TEP1_2nd Beta-prop_DCAF4 Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 Beta-prop_IP5PC_F Beta-prop_VPS8 Beta-prop_SCAP WD40_MABP1-WDR62_1st Beta-prop_HPS5 Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd Beta-prop_WDR75_1st Beta-prop_IFT140_1st WDR90_beta-prop_4th WD40_MABP1-WDR62_2nd Beta-prop_Vps41 Beta-prop_WDR75_2nd WDR54 Beta-prop_SPT8 Ge1_WD40 Beta-prop_IFT122_1st PEP5_VPS11_N
Other DBs
NCBI-GeneID: 110804201
NCBI-ProteinID: XP_021865455
UniProt: A0A9R0KCF7
LinkDB
Position
2:complement(62214754..62224370)
AA seq 452 aa
MEEVILASSSMDGGVGRFDLDVIPEKYRKEGAPSSYKTCLSPPHGLVSVGGRFLASSQLR
ESSTSGLIHYWSWNKPQPEVRSFPAEPIKPLVSNREGTYLIGGGVSGDIFVWEVFTGRLL
KKWRAHYGAVSCLTLSDDESLLISGAEDGRVKVWSLFMMFDDARRKEARHDHVHNFREHT
LRVTDVKSGHGGSNAVIISASEDQTCKVWSLATGRLLRNIIFPSVIDAIAIDVGEYAFYA
GGRDGKIYIAALNALTTSSSTDYGKHIIGFIANSSCRAVTSLAFRADGFSLVSGSEDGQI
RVWDTRTRDIVRLFPHGKGPVTNILITRSPERELKSQASLGKRTSLPPPLEKYANSSDEP
VGTKAFIGCDSSSNQAGGSCLIEHVMNNQIKEFQQQGSTTAAEMEVERLKLECMTAKQMV
QQWKNMYDHLHQFCVDELVDDSQAKHIKINSA
NT seq 1359 nt   +upstreamnt  +downstreamnt
atggaggaggtcattttggcgtcgtcctccatggacggcggcgtaggtcgctttgactta
gatgttatccccgagaaataccgtaaggagggggcgccgtcgtcttacaaaacatgcttg
tcccctcctcacggcctcgtttccgttggcggccgtttcctagcctcctctcagctccgg
gagtcctccacttccggcctcattcattactggtcatggaacaagcctcagccggaagtg
aggagttttccggcagagccaattaaacccttggtgtcgaatcgcgaaggtacataccta
attggtggcggcgtttcaggcgatatttttgtttgggaggtttttactggtagattgctc
aagaaatggcgtgcgcattatggggcagtttcatgtttgacattatccgatgatgaatcc
ctgctaatatctggtgcagaagatggacgtgttaaagtttggtcgctcttcatgatgttt
gacgatgctagaagaaaggaagcgaggcatgaccatgtacataattttcgggagcatact
ctacgtgttacagatgtcaaatcaggtcatggtggatctaatgctgtcattatttctgct
tctgaagatcaaacttgtaaggtgtggagcttggcaacaggaagattgctgcggaacatt
atattcccgtctgttattgatgcaattgccattgatgtgggagagtatgctttttatgct
ggcggtagagatggcaaaatatacatagctgcacttaatgctttaactacgagcagtagt
actgactatgggaagcatatcattggctttatagctaactcaagctgtagggctgttacc
tctctagcattccgtgctgatggattctcgttggtttctggatcagaggatggacaaatt
cgcgtatgggatactagaactcgtgatattgttcgcctatttccacacggtaaaggtcca
gtgaccaacattctgattactaggtctccagagagagaattgaagtcccaagcttctctt
ggaaagaggacctcattacctcctccacttgaaaaatatgcaaactctagtgacgaacct
gtgggcacaaaggcttttattggttgtgacagctcttctaatcaagctggtggttcttgc
ctcattgaacatgtgatgaacaaccaaatcaaagagtttcagcaacaaggttcaactact
gcggcagaaatggaagttgagcgactaaagctggagtgcatgacagcaaagcagatggtc
caacaatggaaaaatatgtacgatcatttgcatcagttttgtgttgatgaacttgttgat
gatagtcaagctaagcatattaaaattaattctgcttga

DBGET integrated database retrieval system