Spinacia oleracea (spinach): 110804330
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Entry
110804330 CDS
T05137
Name
(RefSeq) sm-like protein LSM7
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
soe
Spinacia oleracea (spinach)
Pathway
soe03018
RNA degradation
soe03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110804330
09123 Folding, sorting and degradation
03018 RNA degradation
110804330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
soe03019
]
110804330
03041 Spliceosome [BR:
soe03041
]
110804330
Messenger RNA biogenesis [BR:
soe03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
110804330
mRNA degradation factors
5'-3' decay
Lsm complex
110804330
Spliceosome [BR:
soe03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
110804330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Hfq
DUF150_C
Motif
Other DBs
NCBI-GeneID:
110804330
NCBI-ProteinID:
XP_021865597
UniProt:
A0A9R0KCB2
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Position
5:complement(28751662..28773202)
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AA seq
99 aa
AA seq
DB search
MSSRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEYLRDADDPLKT
TDQTRRLGLIVCRGTAVMLVSPTDGTDEIANPFIQPDGA
NT seq
300 nt
NT seq
+upstream
nt +downstream
nt
atgtccagtcgaaaagaaacagttttagatcttgccaagtttgttgacaagggggttcaa
gttaagcttacgggtggaagacaagtgaccgggacactcaagggatacgatcagttattg
aaccttgtgctagatgaagccgttgaatacctgagagatgctgatgacccactgaagacc
actgaccagacgagacgccttggcttaattgtttgtagaggaacagcagtgatgcttgtt
tccccaacagacggcactgatgagattgcgaatcctttcattcagccagacggtgcttag
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