Spinacia oleracea (spinach): 110804494
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Entry
110804494 CDS
T05137
Name
(RefSeq) AMSH-like ubiquitin thioesterase 1
KO
K11866
STAM-binding protein [EC:
3.4.19.12
]
Organism
soe
Spinacia oleracea (spinach)
Pathway
soe04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
110804494
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
soe01002
]
110804494
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
soe04131
]
110804494
04121 Ubiquitin system [BR:
soe04121
]
110804494
Enzymes [BR:
soe01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
110804494
Peptidases and inhibitors [BR:
soe01002
]
Metallo peptidases
Family M67
110804494
Membrane trafficking [BR:
soe04131
]
Endosome - Lysosome transport
Others
Others
110804494
Ubiquitin system [BR:
soe04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
110804494
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JAB
USP8_dimer
Prok-JAB
Motif
Other DBs
NCBI-GeneID:
110804494
NCBI-ProteinID:
XP_056683872
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All DBs
Position
5:20295102..20308106
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AA seq
516 aa
AA seq
DB search
MKPSSGRIDIAANAKKLDVDNRISLRIYFRIADNILRQATIFRNEKNIIDLYVMLLRFSS
LVSETIPRHREYAASPQSKKSSLKKQLLITLTELEALNPAVKEKVKELERKPRYQVIGWN
YNDRPNENHSLSSSMQWPPINAHCPTNNQIVKATQIFSDGVYGGLNAQQKVHTIPLEERF
QKLSLSIPRPKEETLLRHSILGPNGLCGQWQPPVADKGVRYPSIIDTTPVEIPRLQQVMA
IEDGAAAIKGASTLNCEKPSLQPTPEPAIDSQKPQDDEKPMILFETSDVPDTVIVKQPSP
PAILAEVQDLISAEPPLTTEIHDTMDSSLQDSLLQPESPMELHISTSMMDTFLRLAKSNT
SKNLETCGILAGSLKNRKFYITALIIPKQESTTDTCQATNEEEIFEVQDKRSLFPLGWIH
THPTQSCFMSSVDVHTHYSYQVMLPEAVAIVMAPRDRNKTHGIFRLTTPGGMSVIRHCER
RGFHSHEQPADGGPLYKQCTDVYMNPKLKFDVIDLR
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgaagccgtcttctggacgtatcgacattgctgctaacgctaagaagctcgatgtcgat
aatcgtatttcactgcgtatttacttcaggatcgccgataatatactcagacaggctact
atcttccggaacgagaagaatattatagacctctatgttatgcttctgagattttcgagt
ttggtatctgagactatcccacgccatagagaatatgcagcatctccacaaagcaaaaaa
agttcattgaagaagcaattgctaattactttgactgaattggaggcattgaatccagcc
gtaaaggagaaggttaaagaactagaaagaaagcccaggtaccaagttattggttggaac
tataatgatcgtcccaacgaaaatcattctcttagttcttccatgcaatggcctcccatc
aatgcacactgtccaactaataatcaaatagttaaggcaacgcaaattttttctgatggt
gtatatggaggtttaaatgctcagcagaaagttcataccatccctctggaagagaggttt
caaaaattatctctttccattccccgtccaaaggaggaaacacttttaagacattcaatt
ctgggaccaaatgggctctgcgggcagtggcaaccacctgtcgctgataaaggggttcgt
taccccagtattattgatacgactcctgttgagattccaaggctccaacaggtcatggct
attgaagatggggctgcagcaattaaaggtgctagcaccttgaattgtgaaaaaccaagt
cttcaacctacacctgaacctgctattgatagtcagaagccacaagatgacgagaagcca
atgattttatttgaaacgtctgatgttcctgatacagttattgtcaagcaacctagccct
ccagctatacttgcagaggtgcaagacttaatctctgcagagccacctctaacgaccgaa
atacacgacacaatggatagttctttgcaagatagtttgcttcagccagaatctccaatg
gagctgcacatatcaacaagtatgatggatacattcttgagactggctaaatcgaatacc
tcaaaaaatctggagacttgtggtattcttgccggttcacttaagaacagaaaattctat
attacagctttgataattccgaagcaggaatcaacaaccgatacctgtcaggcgacaaat
gaagaggagatatttgaagtacaagacaaaagatcgcttttcccattgggatggattcat
actcatcccacacaatcatgtttcatgtcatcagttgatgttcatacccattactcatat
caggtcatgttgcctgaagctgttgcaattgtaatggcaccaagagatagaaacaaaact
catggcattttccgattgacaacccctggtggcatgtcggttattagacattgtgagcgg
cgtggatttcattcacatgaacagcctgctgatggcggacccttatacaaacaatgtaca
gatgtatatatgaatcccaagttgaagtttgatgttattgatcttagatga
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