Spinacia oleracea (spinach): 110804778
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Entry
110804778 CDS
T05137
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 2 homolog B-like
KO
K08775
breast cancer 2 susceptibility protein
Organism
soe
Spinacia oleracea (spinach)
Pathway
soe03440
Homologous recombination
soe03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
110804778
03460 Fanconi anemia pathway
110804778
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
soe04121
]
110804778
03036 Chromosome and associated proteins [BR:
soe03036
]
110804778
03400 DNA repair and recombination proteins [BR:
soe03400
]
110804778
Ubiquitin system [BR:
soe04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
110804778
Chromosome and associated proteins [BR:
soe03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
110804778
DNA repair and recombination proteins [BR:
soe03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
110804778
FA (Fanconi anemia) pathway
Downstream FA components
110804778
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCA-2_OB1
BRCA2
BRCA-2_helical
Rep-A_N
Motif
Other DBs
NCBI-GeneID:
110804778
NCBI-ProteinID:
XP_021866079
UniProt:
A0A9R0KC09
LinkDB
All DBs
Position
6:136529169..136538988
Genome browser
AA seq
1113 aa
AA seq
DB search
MVSTWQLHSDGGDNFRWEISPTPKPSHQQNNYHCSTPPPSLPSFHDVLVQGCSKILEDCN
KRNVVVDDDITPMFRTGSGSSVVLKKSSIAKAYSVLGDDIVDNFDTGQPCFKGNGFTSPN
SMFQTGSGKKVNISSTGLIRARAMLGIEENNDDCSIEGFEPAKKKFRGVDTSASEIRSHL
GKRKIGISSEGAENDMHCSKFPFHLKSDASGTEFGDEDFGKLIRPEMSDSTCKPPAIKFN
TAGGRSISVSRDALQRARNLLGDPEMESLSNEGDAGASMFSFFKHENSGGSFLNKENTTD
FSHQFEQNPKIFVSPMKSSTKNPLEAKSETLISGTNLMRKFDDEEVICNSNGKLSSSCPT
KSLQGKPLVPDAILQPSMVNGAGPGLHRLSKPSGGKLADITNTISIDSAVSTTKKGIITD
LRRLGKRSSVSPFKMPRNSKFITPLNCNLSSAPNELSSRESEASYCRKRVCTRYPFQHSR
LYVKEFFKKPPTSSIMLEHIPEQERHINPRTSEKYTFCDGSQLLGVENFYHMLVQSGASA
QHASKEWVANHYKWIVWKLASYERYYSSKFMKKFLIVSNVHEELKYRYEREVNHGQRSAI
KRILEGDASPSSMLVLCVSDIENPSTSMAEKSSNFRIELTDGWYSVCAQLDVMLSKQLDA
GKLFVGQKLRICGAGLNGWNGPVSPLKASSAISLMLHMNGTYRASWHERLGFCRGVCAPL
AFRCIKDNGGLIPRTLVGVTRIYPVLYRERLKSGGYIVRSEKLEASLTQLYNQRRSNVVE
GLTSDFQRGLVGSCIENDYDNEGAKILKMLESAAEPELLMAEMSSEQLSLFSKYRAKIDE
TRQGDLQRLIEKALEDAGLSARNVTPFMRVRVVGLKSRGQYKGEVQREGLITIWNPTEQQ
MLELVEGQPYAISGLIPLHSDLTTLYLQARGSSTKWKPLTTKEKESFGPFFNPRKSVSLS
RMGEVPLSSEFDTAVLVLHVGLEYISGQQKRQWVFVTDGSLCERQTEVSTISLLAISYCS
QCSDDDSISPINNNLVGSIVGFCNLVKRAKDHANDMWVAEATENSTYFLKYNDPYCSHLK
DAFGLVKKWEQSGSSIIEMLREKVLHIVGGSKG
NT seq
3342 nt
NT seq
+upstream
nt +downstream
nt
atggtgtcaacttggcagctacattccgacggcggagacaatttccgatgggaaatatct
ccaacgccgaaaccctcccaccagcaaaacaactaccactgctctactcctccgccttct
ctcccttccttccacgacgttctggttcaaggatgttcgaagattttggaagattgtaat
aaacggaatgttgttgttgatgatgatattactccgatgtttcgaactggatcgggaagc
tctgttgttctgaagaagtcgtcgattgcgaaagcttattctgttcttggagatgatatc
gtcgacaattttgatacagggcaaccatgttttaaaggaaatggtttcacttcccccaat
tcgatgtttcaaacaggctctgggaagaaggttaatatttcttctactggacttatcaga
gctagagcaatgttgggtatcgaagaaaataacgatgattgttccatcgaaggttttgag
cctgcaaaaaagaaatttcgtggagtggacacgtctgcgagtgaaatacgatcacattta
gggaagaggaagatagggatcagcagcgagggagccgaaaatgacatgcactgctcaaag
tttccgtttcatttgaagagtgatgcatcaggaactgagtttggtgatgaggattttggt
aaacttatacgaccagagatgtctgattctacctgcaaaccacctgcgattaagttcaat
actgcaggtggtagatcaatttcagtatctagggatgccttgcagcgagcgcgaaacctt
ctcggtgacccagagatggaaagtctttcaaatgaaggggatgcaggtgcttccatgttt
tcgtttttcaagcatgagaattctggtgggagcttccttaacaaggaaaacacgactgat
ttttctcatcaatttgaacaaaatccaaagatctttgtatcgccaatgaagtcatctact
aaaaatcctttggaagctaaatcagaaaccttgatctcagggacgaatttaatgaggaaa
tttgatgatgaggaagtcatctgcaattccaatggtaaactatcctcatcatgtccgaca
aagagtttgcaagggaaacctcttgtaccggatgcaatacttcaaccctccatggtcaat
ggtgccggtccaggtttacatagactctcaaagccatctggggggaaactagctgatata
acaaacactataagcattgactctgcagtctctacaactaaaaaaggaataatcactgat
ctaaggagacttgggaaacgaagttctgtttctccattcaagatgccaagaaattcaaag
ttcatcactcctctgaactgcaacctttcttcggccccaaatgaattgtccagcagggaa
tccgaggcttcatattgtcgaaaaagggtttgtacccgttatccctttcagcactcaaga
ttgtatgtcaaggagttttttaaaaagcctccaacctcttcaataatgctggagcatatt
ccagagcaagagcggcacataaatcctagaacttcggagaaatacacattttgtgatgga
tcccagctattaggtgttgaaaatttctaccatatgctggttcagtcaggagcttctgcg
caacatgcatccaaagagtgggtcgcaaatcactacaagtggattgtgtggaaacttgct
agctatgagagatattattcatctaaatttatgaagaagttcttaatagtttctaatgtt
catgaggagttgaagtatagatatgaacgtgaagtcaatcatggtcagcgttctgcaatc
aaaaggattttagaaggagatgcatcaccttcttccatgctggtgctatgtgtctctgat
attgagaatccaagtacaagtatggcggaaaagagtagcaattttagaatagaacttact
gatgggtggtactctgtatgtgcccagttagatgtcatgctgtcaaagcaacttgatgcg
gggaaattatttgtgggacaaaaactacggatatgtggagctggtttaaatggctggaat
ggacctgtttctccacttaaggcatcatcagcaattagcttaatgctgcatatgaacgga
acatacagagctagctggcatgaacgtttaggattctgtcgaggggtgtgtgcaccattg
gcgtttagatgcatcaaggataatggaggtctaatccctaggaccctagttggagttacc
aggatatatcctgttctttacagagaaaggttgaagagtggaggctatattgtgaggtca
gaaaagttggaagcttcacttactcagctttacaaccagaggcgctctaacgtcgtagaa
ggacttacatcagactttcagagaggtttggttggttcttgtatagagaatgactatgat
aatgaaggagcaaagatcctgaagatgcttgagagtgctgctgaaccagaactattgatg
gcagaaatgagttctgagcagttatcattattctcaaagtatcgagcgaaaattgatgag
acaaggcagggagacttgcagaggttgatcgagaaggcacttgaagatgcaggattaagt
gctagaaacgtcaccccatttatgcgagtaagggttgttggactgaaaagtagaggacaa
tacaaaggtgaagtccaaagggaagggttaattacaatctggaatcctaccgaacagcag
atgctagagctggtagaggggcagccttatgctatttcaggtctcataccgttgcattct
gatttaactacactatatttacaagctagaggttctagcactaaatggaagcctttgact
acaaaagaaaaggaatcattcgggcccttcttcaatcctcgcaagtcagtatcattatca
agaatgggggaggttcctctgtccagtgaatttgatactgctgtgctggttttacacgtg
ggcctagagtatatatctggtcaacaaaaaagacagtgggtgtttgtaactgatggatcc
ttgtgcgagcgacaaacagaagtatcaacaatctccttgctggctataagctactgttcc
caatgctctgacgatgattccatatctccaattaataataaccttgttggcagcatagtt
gggttctgcaatcttgtgaagagagctaaggatcatgcaaatgatatgtgggtagcggaa
gctacagaaaattcgacatatttcctcaagtataatgatccatattgttcccatctcaaa
gatgcctttggtctcgttaagaaatgggagcaaagtggtagctcaataatcgagatgctc
agagagaaggttttgcatatagttggtggttctaaaggctag
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integrated database retrieval system
