Spinacia oleracea (spinach): 110805024
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Entry
110805024 CDS
T05137
Name
(RefSeq) light-mediated development protein DET1
KO
K10571
de-etiolated-1
Organism
soe
Spinacia oleracea (spinach)
Pathway
soe04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
110805024
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
soe04121
]
110805024
Ubiquitin system [BR:
soe04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
110805024
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Det1
Motif
Other DBs
NCBI-GeneID:
110805024
NCBI-ProteinID:
XP_021866313
UniProt:
A0A9R0JG51
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Position
5:18441281..18452774
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AA seq
536 aa
AA seq
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MFRSNNLVARLFERQTHRSTPGTNIHRARQFYENLVPSYTIYDVECPDHSFRKFTEDGQY
LISFSRNYQELIVYRPSWLSFSCCGEECDVHDLPPRANKFSSFFTQLYCVSLASSNELIC
KDFFLYMESNRFGLFATSTAQVHDAPATGGAVQGVPSIEKITFHLLRLEDGIILDKKVFH
NDFINLAHNMGVYLYEDLVAVVSLRYQTIHIIQVRESGNLVDVHAIGEFCRDDDELFLHS
SAQCGTINENSRQKQALLNSNEGVPNSGHSTTPNVFLSGIKQRLLSFIFQGIWNEEADET
NRVQRLKKKFYFHFQDYVDLIIWKVQFLDRHHLLIKFGSVDGGVSRNADHHPAFFAIYNM
EAAEFVAFYQNSADELYFLLEKFADHFYTPPNNSLHTNFISSHSNNLNACEQLTCLKNKS
VSFSQFVKKTLVSLPFTCQSQSPSPYFDQSLFRFDEKLISATDRHRQSTDHPIKFISRRQ
PKIPKFKIKPGPEAGNTDARAKKVSSFLFHPILPLVISIQQTMFLQFSVVNIHFRK
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgtttagaagcaacaatcttgttgctagattgtttgaacgccagactcatcgttctact
cctggcaccaatattcatcgcgctaggcaattttatgagaatctcgtgccaagttatacc
atttatgacgtggaatgcccggatcattctttccgcaaattcactgaagatggtcagtac
ctgataagcttcagtaggaactaccaagagcttattgtttatagaccatcatggttgtca
ttttcatgttgcggtgaagagtgtgatgttcatgacctcccaccgagagcgaacaagttc
agtagcttcttcacacagttatactgtgtatcacttgcatcaagcaatgagcttatttgc
aaagacttttttctatatatggagagtaatcgatttggactcttcgcaacttctactgca
caagttcacgatgctccggccaccggaggtgctgtacaaggtgttccatctatagaaaag
ataacctttcacctactgagattggaagatggcattatattggacaagaaggtctttcac
aatgattttattaacttggcacataatatgggtgtgtatctatatgaagatctggtcgct
gttgtgtctctccgctatcagactatacatattatccaagtaagggaatctggaaacctt
gttgatgtgcatgcgattggagaattttgtcgagatgatgacgaactcttcctgcattca
agtgctcagtgtggaacaataaatgagaatagtagacagaagcaagcccttctgaacagc
aatgaaggtgttcccaacagtggtcattctacgacaccaaacgttttcctcagtggcatc
aaacagaggttactttcgttcatatttcaagggatatggaatgaagaagcggatgaaaca
aatagggtccaacggttgaagaagaagttctattttcattttcaagattatgttgacttg
ataatatggaaggttcaattcttggacagacatcacttgttgatcaaatttggcagtgtg
gatggaggggtctcccgaaatgcggaccaccatcctgccttctttgctatatataatatg
gaggctgcggaatttgtagcattttaccagaattcggcagatgagctttattttttgctc
gagaaatttgctgaccatttttacacgcctccgaacaattcattgcatacgaatttcata
tcatctcattcaaataacctcaatgcctgtgagcaattaacctgcttgaaaaataagtcc
gtcagtttttctcagtttgtgaagaaaacattggtgtctttacctttcacttgtcagtcg
cagagtccgtctccgtattttgatcagtccctttttcggtttgatgagaagctgatttcg
gcaactgatcgacatagacaatccacagaccatcccattaaatttatctcaaggaggcaa
cccaagattccaaaattcaagattaaaccaggtccagaagctgggaatacagatgctcgg
gcaaagaaggtatcctcgttcctgttccatccaattctacctcttgtcatatccattcag
caaactatgttcttacagttctcagttgtgaatattcacttccggaaatga
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