Spinacia oleracea (spinach): 110805173
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Entry
110805173 CDS
T05137
Name
(RefSeq) vacuolar protein sorting-associated protein 35B-like
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
soe
Spinacia oleracea (spinach)
Pathway
soe04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
110805173
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
soe04131
]
110805173
Membrane trafficking [BR:
soe04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
110805173
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
Motif
Other DBs
NCBI-GeneID:
110805173
NCBI-ProteinID:
XP_056687193
UniProt:
A0ABM3QV26
LinkDB
All DBs
Position
6:73096693..73128120
Genome browser
AA seq
790 aa
AA seq
DB search
MIVDGIEDEEKWLAEGIAAVQQNAFYMLRAVDSDNLREALKYSAQMLSELRTSKLSPHKY
FELYMRAFDELKKLEIFFKDESRHGLSVSDLYELVQHAGNVLPRLYLLCTVGSVYIKLNE
ASCKDLLKDLVEMCRAVQHPIRGLFLRSYLCQVTRDKLPDIGSENEGVGDSVMDAVDFVL
QNFMEMNKLWVRLQHQGPGRIKEKREKERNELRDLVGKNLHILSQIEGVDLELYRDTVLP
RILEQVVNSKDELAQHYLMDCIIQVFPDEYHLQTLDVLLAACPQLQPTVDIKTVLSQLME
RLSNYAASSTEVLPEFLQVEAFSKLYNAIGKVIEAQIDMPIVGAITLYTSLLMFTLRVHP
DRLDYVDLVLGACVKKLSGRPKLEDSRATKQIIALLSAPLDKYNDAVTALTLSSYPRIMD
YLDNDTNKIMAMVIIQNILKNYTCISTADQVEALFELIKGLIKDIDGSSVDEVDEEDFNE
EQNSVARLIHMLYNDDPDEMLKIICTVERHIMTGGQRRLPFTVPPLVFSALKLVRRLQGQ
DGEADGEEAPASPKKIFRLMNQTIEALSSVPSPDLALRLYLQCAEAASDCDLEPIAYEFF
TQAFILYEEDIADSKAQFTAIHLIIGTLQRMNVFGVENRDTLTHKATGYSAKLLKKADQC
RAVYACSHLFWVDDQDGTKDGERVLLCLKRSLRIANAAQQMANVTRGSSGPVTLFVEILN
KYLYFFEKGNPKVTSSAIQGLVELIRTEMQSDTSTPDLAATAFFNSTLRYIQFQKQKGGV
MGEKYDPVKL
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgatagtcgacggaatcgaagacgaagagaaatggctagcagaaggaatcgcggccgta
caacagaatgccttctacatgctccgtgctgtggattccgataatctcagagaagctctc
aagtactccgcgcaaatgctttcggagctccggacctccaaactttctcctcacaagtat
ttcgaactctatatgcgagctttcgatgaattgaagaagttggagatattcttcaaggat
gagagtaggcatggtctttcagtgtctgatctttacgaacttgttcagcatgccggcaat
gtgttgcctaggctgtacctcctttgtaccgtgggttctgtgtacatcaaattgaacgag
gcttcctgtaaagatcttttgaaagaccttgttgagatgtgtcgtgctgttcaacatcct
attcgtggtcttttcttgaggagctacctttgtcaagtcacaagagacaagcttcctgat
attggttcagagaatgaaggagttggtgactctgtgatggatgctgttgattttgtgctg
caaaacttcatggagatgaataaactttgggttcgtctacagcatcaggggcctggtcgg
ataaaagagaaacgagaaaaggagaggaatgaacttcgtgatcttgttgggaaaaatctg
catatactaagtcaaatagagggtgttgatcttgaattgtacagagatactgttcttccc
agaatcctagagcaggttgttaattccaaagatgagcttgcacaacattatttgatggac
tgtattatccaagtttttccagatgagtatcacttgcaaacgcttgacgtattattagct
gcttgtccgcagcttcagccgacagttgacatcaagacagtgctatcgcagttgatggag
agactttcaaactatgctgcatcgagtacagaagtattacctgaattcctgcaagtggaa
gcgttttctaaattgtacaatgcaattggaaaggttatcgaggcacaaattgacatgcca
attgttggagccataacgttatacacttcacttcttatgttcactcttcgtgttcatcct
gatcgcttagactacgtggatctagttctgggcgcatgtgtcaagaaactttctgggagg
ccaaagcttgaagacagccgagcaacaaaacaaattattgctcttttaagtgctccattg
gacaaatataatgatgcagttacagcacttacactttctagttatccccgtatcatggac
taccttgataatgatacaaacaaaatcatggcaatggttatcatacaaaacattctaaag
aactacacctgcatttccactgctgatcaggtagaggcactattcgaattgatcaaaggg
cttattaaagatatagatggaagctcagtggatgaggttgatgaggaggatttcaacgaa
gaacagaattctgttgcgcgccttatacacatgttgtataatgatgaccctgatgaaatg
ttaaagattatatgtaccgtggagagacatatcatgacaggaggacaaagacggttgccc
ttcactgttcctcctcttgttttttctgcgctcaagttggtcaggcggttacaaggtcaa
gatggtgaggcagatggggaagaagcacctgcttcgcctaaaaaaatattccggttgatg
aatcagactatagaggctctttcatctgttccatctcctgatcttgcattgaggctgtac
ttgcaatgtgctgaggctgccagcgattgtgaccttgagccaatagcctatgaattcttc
acccaagcatttattctatatgaagaagacattgcggactccaaggcacagtttacagcc
atacatcttataattggtactctgcaaaggatgaatgtatttggcgtggagaacagagat
accctaacacataaggcgacagggtactctgcaaaacttttaaaaaaggcggaccaatgc
agagccgtttatgcatgctctcatctattttgggtggatgaccaagatggtaccaaggat
ggagagagggtcttgctatgcctcaaacgttcactacggattgcaaatgctgctcaacag
atggcaaatgtgacgcgtggaagcagtgggccagttaccttgtttgttgaaattttgaac
aagtatctctatttcttcgagaagggaaatccaaaagtaacaagttcagcaatccaaggc
cttgtagagttgataagaactgaaatgcaaagcgacacatcaactccagatctagccgcc
actgccttttttaacagcactttgcggtacatccaattccagaaacagaaaggaggtgta
atgggtgaaaagtacgatccagttaagctatga
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