Spinacia oleracea (spinach): 110805236
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Entry
110805236 CDS
T05137
Name
(RefSeq) protein RAE1
KO
K14298
mRNA export factor
Organism
soe
Spinacia oleracea (spinach)
Pathway
soe03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110805236
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
soe03019
]
110805236
03036 Chromosome and associated proteins [BR:
soe03036
]
110805236
Messenger RNA biogenesis [BR:
soe03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
110805236
Chromosome and associated proteins [BR:
soe03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
110805236
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_EML
EIF3I
ANAPC4_WD40
Beta-prop_HPS5
WD40_MABP1-WDR62_2nd
Beta-prop_WDR19_1st
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
WD40_RFWD3
Beta-prop_EIPR1
Beta-prop_WDR75_2nd
Beta-prop_Nup120_160
RES
Vitelline_membr
Motif
Other DBs
NCBI-GeneID:
110805236
NCBI-ProteinID:
XP_021866534
UniProt:
A0A9R0JEN6
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All DBs
Position
4:complement(184730288..184736423)
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AA seq
350 aa
AA seq
DB search
MSAFGSNTASTPTHNPNKSVEVVSPPGDSVSSLCFSPKANILVATSWDNQVRCWEITKNG
MTIGTVPKASISHDQPVLCSTWKDDGTAVFSGGCDKQVKMWPLLSGAQPVTVAMHDAPVK
EVAWIPEMNLLATGSWDKTLKYWDTRQSNPVHTQQLPDRCYALSVSYPLMVVGTADRNIV
LFNLQNPQTEFKRIASPLKYQTRCVTAFPDKQGFLVGSIEGRVGVHHLDDAQQSKNFTFK
CHRDGNDIYSVNSIKFHPVHHTFATSGSDGAFNFWDKDSKQRLKAMSRCNQPIPCSAFNN
DGSIFAYSVSNDWSKGAENHNPAMAKDYIFLHSTQDSEVKAKPRASNGRK
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcatttggatcaaatactgcttctactcccactcataaccctaataaatcagtt
gaggtggtgagtcctcctggggactctgtttcgagtctttgttttagccctaaggccaat
attctggttgctacatcttgggacaaccaggtaagatgttgggaaattacaaagaacggt
atgactattggcactgtccctaaagcatcaatctcacatgatcagcctgtgttgtgttct
acctggaaagatgacggcactgcagtcttttctggtggttgtgacaaacaagtcaaaatg
tggcctttgttgtctggtgcccaaccggtgactgtggctatgcatgacgctcctgtcaaa
gaagttgcttggattcctgagatgaaccttttagccacaggaagctgggacaagactcta
aagtattgggataccagacagtcaaaccctgtgcacacacaacaacttcctgatcgttgc
tatgctctttctgtgtcgtatccattaatggtcgtcggaacggcagacagaaacattgtt
ctttttaatttacagaatccccagacagagttcaagaggattgcatcacccttgaagtat
caaacaagatgtgttactgcctttcctgataaacaaggctttctggttggctcaattgaa
ggaagggttggtgtgcatcatcttgatgatgcacaacagagcaagaactttactttcaaa
tgtcatagggatggaaatgatatatactcggtcaattcaataaaattccatcctgtgcat
cacacgtttgcaacttcaggatctgatggtgccttcaacttttgggacaaggatagcaaa
cagcggctcaaggctatgtcgaggtgcaaccagccgataccttgcagtgctttcaacaat
gatggctcaatcttcgcttactcggtgagtaatgactggagtaaaggtgcagaaaaccat
aatccagcaatggccaaggattacatatttctgcactctactcaggattctgaggttaaa
gccaagccacgagcaagtaacggtaggaagtga
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integrated database retrieval system