KEGG   Spinacia oleracea (spinach): 110805236
Entry
110805236         CDS       T05137                                 
Name
(RefSeq) protein RAE1
  KO
K14298  mRNA export factor
Organism
soe  Spinacia oleracea (spinach)
Pathway
soe03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:soe00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    110805236
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:soe03019]
    110805236
   03036 Chromosome and associated proteins [BR:soe03036]
    110805236
Messenger RNA biogenesis [BR:soe03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     110805236
Chromosome and associated proteins [BR:soe03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    110805236
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 WDR55 Beta-prop_RIG_2nd Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_EML EIF3I ANAPC4_WD40 Beta-prop_HPS5 WD40_MABP1-WDR62_2nd Beta-prop_WDR19_1st Beta-prop_IFT122_1st WDR90_beta-prop_4th Beta-prop_WDR75_1st WD40_RFWD3 Beta-prop_EIPR1 Beta-prop_WDR75_2nd Beta-prop_Nup120_160 RES Vitelline_membr
Other DBs
NCBI-GeneID: 110805236
NCBI-ProteinID: XP_021866534
UniProt: A0A9R0JEN6
LinkDB
Position
4:complement(184730288..184736423)
AA seq 350 aa
MSAFGSNTASTPTHNPNKSVEVVSPPGDSVSSLCFSPKANILVATSWDNQVRCWEITKNG
MTIGTVPKASISHDQPVLCSTWKDDGTAVFSGGCDKQVKMWPLLSGAQPVTVAMHDAPVK
EVAWIPEMNLLATGSWDKTLKYWDTRQSNPVHTQQLPDRCYALSVSYPLMVVGTADRNIV
LFNLQNPQTEFKRIASPLKYQTRCVTAFPDKQGFLVGSIEGRVGVHHLDDAQQSKNFTFK
CHRDGNDIYSVNSIKFHPVHHTFATSGSDGAFNFWDKDSKQRLKAMSRCNQPIPCSAFNN
DGSIFAYSVSNDWSKGAENHNPAMAKDYIFLHSTQDSEVKAKPRASNGRK
NT seq 1053 nt   +upstreamnt  +downstreamnt
atgtctgcatttggatcaaatactgcttctactcccactcataaccctaataaatcagtt
gaggtggtgagtcctcctggggactctgtttcgagtctttgttttagccctaaggccaat
attctggttgctacatcttgggacaaccaggtaagatgttgggaaattacaaagaacggt
atgactattggcactgtccctaaagcatcaatctcacatgatcagcctgtgttgtgttct
acctggaaagatgacggcactgcagtcttttctggtggttgtgacaaacaagtcaaaatg
tggcctttgttgtctggtgcccaaccggtgactgtggctatgcatgacgctcctgtcaaa
gaagttgcttggattcctgagatgaaccttttagccacaggaagctgggacaagactcta
aagtattgggataccagacagtcaaaccctgtgcacacacaacaacttcctgatcgttgc
tatgctctttctgtgtcgtatccattaatggtcgtcggaacggcagacagaaacattgtt
ctttttaatttacagaatccccagacagagttcaagaggattgcatcacccttgaagtat
caaacaagatgtgttactgcctttcctgataaacaaggctttctggttggctcaattgaa
ggaagggttggtgtgcatcatcttgatgatgcacaacagagcaagaactttactttcaaa
tgtcatagggatggaaatgatatatactcggtcaattcaataaaattccatcctgtgcat
cacacgtttgcaacttcaggatctgatggtgccttcaacttttgggacaaggatagcaaa
cagcggctcaaggctatgtcgaggtgcaaccagccgataccttgcagtgctttcaacaat
gatggctcaatcttcgcttactcggtgagtaatgactggagtaaaggtgcagaaaaccat
aatccagcaatggccaaggattacatatttctgcactctactcaggattctgaggttaaa
gccaagccacgagcaagtaacggtaggaagtga

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