KEGG   Spinacia oleracea (spinach): 110805591
Entry
110805591         CDS       T05137                                 
Name
(RefSeq) ubiquitin-40S ribosomal protein S27a
  KO
K02977  ubiquitin-small subunit ribosomal protein S27Ae
Organism
soe  Spinacia oleracea (spinach)
Pathway
soe03010  Ribosome
soe04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:soe00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    110805591
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    110805591
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:soe03011]
    110805591
   04121 Ubiquitin system [BR:soe04121]
    110805591
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:soe04147]
    110805591
Ribosome [BR:soe03011]
 Ribosomal proteins
  Eukaryotes
   Small subunit
    110805591
  Archaea
    110805591
Ubiquitin system [BR:soe04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   110805591
Exosome [BR:soe04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   110805591
  Exosomal proteins of colorectal cancer cells
   110805591
SSDB
Motif
Pfam: ubiquitin Ribosomal_S27 Rad60-SLD Ubiquitin_2 Rad60-SLD_2 Plexin_RBD OTU1_UBXL Dsc3_N DUF2604 UBL_UBAC1 TBK1_ULD GIY-YIG Fer2_3 Ubiquitin_5 Ogr_Delta
Other DBs
NCBI-GeneID: 110805591
NCBI-ProteinID: XP_021866904
UniProt: A0A0K9RKZ3
LinkDB
Position
6:139018334..139019083
AA seq 156 aa
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGAKKRKKKTYTKPKKLKHKKKKVKLSILQFYKVDDSAKVQRLRKE
CPNAECGAGTFMANHFDRHYCGKCGLTYVYQKAGGD
NT seq 471 nt   +upstreamnt  +downstreamnt
atgcagatcttcgtgaaaaccctaaccgggaaaaccataaccctagaggtagaatcctct
gacacaatcgacaatgtgaaagccaagatccaagacaaggaaggcatccccccagaccag
cagcgtcttatcttcgccggaaaacagcttgaagacggacgcacacttgccgactacaac
atccagaaggagtctaccctccaccttgtccttcgccttcgtggtggcgcaaagaagagg
aagaagaagacctacaccaagcctaagaagcttaagcacaagaagaagaaggtcaagctt
tctattcttcagttttacaaggtcgatgattccgctaaggttcagaggttgaggaaggag
tgccctaatgctgagtgtggtgctggtacttttatggctaaccattttgatcgccattat
tgtggtaagtgtggccttacctatgtttaccaaaaggctggaggtgattaa

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