KEGG   Spinacia oleracea (spinach): 110805923
Entry
110805923         CDS       T05137                                 
Name
(RefSeq) uncharacterized protein LOC110805923
  KO
K12857  Prp8 binding protein
Organism
soe  Spinacia oleracea (spinach)
Pathway
soe03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:soe00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110805923
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:soe03041]
    110805923
Spliceosome [BR:soe03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    110805923
 Complex C
   U5 SnRNP specific factors
    110805923
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 WD40_WDHD1_1st WDR55 EIF3I Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_EIPR1 WD40_MABP1-WDR62_1st Beta-prop_RIG_2nd Beta-prop_SCAP Beta-prop_SPT8 Beta-prop_IFT122_1st ANAPC4_WD40 NBCH_WD40 Beta-prop_IFT140_1st WDR90_beta-prop_4th Beta-prop_DCAF4 Beta-prop_WDR19_1st Beta-prop_WDR35_TULP_N WD40_RFWD3 Beta-prop_HPS5 Beta-prop_WDR75_2nd Beta-prop_DCAF12 Beta-prop_Nup120_160 RMC1_N
Other DBs
NCBI-GeneID: 110805923
NCBI-ProteinID: XP_021867237
UniProt: A0A9R0KD39
LinkDB
Position
4:143699901..143706040
AA seq 345 aa
MLATTHNSESALSVAGPRPMEWSTMPYNAPQASGPNGRQRTSSLESPIMLLTGHQSAVYT
MKFNPEGTVIASGSHDREIFLWNVHGDCKNFMVLKGHKNAVLDLHWTTDGTQLVSASPDK
TVRAWDAETGKQIKKMAEHSSFVNSCCPARRGPPLVVSGSDDGTAKLWDMRHRGAIQTFP
DKYQITAVAFSDASDKIYTGGIDNDVKVWDIRKNEVTMTLQGHTDMITGMSLSADGSYLL
TNGMDCKLCVWDMRPYAPQNRCVKVLEGHQHNFEKTLLKCAWSPDGSKVTSGSADRMVYI
WDTTSRRILYKLPGHTGSVNECVFHPREPIVGSCSSDKQIYLGEL
NT seq 1038 nt   +upstreamnt  +downstreamnt
atgctggctactacacataacagtgaaagtgctttatccgtggctggtcctaggccaatg
gagtggtccactatgccgtataatgctcctcaggcctctgggcctaatgggcgacagcgt
acatcaagtttggaatctccaatcatgttgttgaccggccaccaaagtgcagtatatacc
atgaagttcaatccagaaggaacagtaattgcatcaggttcacatgatagagaaatcttc
ttgtggaatgtgcatggtgactgcaaaaatttcatggttttgaagggtcacaagaatgca
gtccttgatcttcattggaccactgatggaacccagttagtttcagcaagtcctgataag
acagttagagcatgggatgccgaaacagggaaacagattaaaaagatggccgagcattct
tcatttgttaattcatgctgtcctgctcggaggggcccacctcttgttgttagcgggtcg
gatgatggaactgcaaagctttgggatatgcgtcacaggggtgccattcagacctttcca
gacaaataccaaataactgctgtagctttttctgatgcatcagataaaatctacacgggt
gggatagacaacgatgttaaagtgtgggatattcgcaaaaatgaagtgaccatgaccctc
caaggccacacggatatgatcaccgggatgtctttgagtgctgatggatcttatcttctc
accaatggtatggactgtaagctctgcgtatgggatatgcgtccctatgctcctcaaaat
cgttgtgtgaaggttctagaaggtcaccagcataactttgaaaagaccttgttgaaatgt
gcttggtctcctgatggtagcaaagtcacttctggaagtgcagaccggatggtttatata
tgggatacaactagtcgtcgcattttgtacaagcttcctggtcatactggctctgtgaat
gaatgtgtttttcacccgagagaacctattgttggatcatgcagtagtgacaaacagatc
taccttggggagctgtaa

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